RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 IGHV1-18A0A0C4DH31 117 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 SLC22A23A1A5C7 686 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 PRSS37A4D1T9 235 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 SHISA9B4DS77 424 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 HS3ST1O14792 307 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 ARPC3O15145 178 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 MGRN1O60291 552 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 DEAF1O75398 565 aaPredicted RBP14.57□□□□□ -0.08
CLK3-207ENST00000562389 UBL3O95164 117 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 FARS2O95363 451 aaKnown RBP14.57□□□□□ -0.08
CLK3-207ENST00000562389 PPP1R3DO95685 299 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 IGLV1-44P01699 117 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 OR8G3PP0DMU2 310 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 ARR3P36575 388 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 CAPZA2P47755 286 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 CD300LDQ6UXZ3 194 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 C20orf204Q6ZNR8 217 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 KBTBD8Q8NFY9 601 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 OR52L1Q8NGH7 329 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 LILRB1Q8NHL6 650 aaPredicted RBP14.57□□□□□ -0.08
CLK3-207ENST00000562389 AKAP1Q92667 903 aaKnown RBP eCLIP14.57□□□□□ -0.08
CLK3-207ENST00000562389 DENND2DQ9H6A0 471 aaPredicted RBP14.57□□□□□ -0.08
CLK3-207ENST00000562389 EGLN3Q9H6Z9 239 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 UBTD1Q9HAC8 227 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 IL20Q9NYY1 176 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 UGT2A1Q9Y4X1 527 aa14.57□□□□□ -0.08
CLK3-207ENST00000562389 HEATR1Q9H583 2144 aaKnown RBP14.57□□□□□ -0.08
CLK3-207ENST00000562389 HRNRQ86YZ3 2850 aaPredicted RBP14.56□□□□□ -0.08
CLK3-207ENST00000562389 H7C1C5 153 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 E2F6O75461 281 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 TIPRLO75663 272 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 HLA-HP01893 362 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 RAF1P04049 648 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 NPR2P20594 1047 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 LCN6P62502 163 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 MRPS34P82930 218 aaKnown RBP14.56□□□□□ -0.08
CLK3-207ENST00000562389 SPOCK1Q08629 439 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 GSG1Q2KHT4 349 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 ZNF672Q499Z4 452 aaPredicted RBP14.56□□□□□ -0.08
CLK3-207ENST00000562389 FOXL2NBQ6ZUU3 175 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 YTHDF3Q7Z739 585 aaKnown RBP14.56□□□□□ -0.08
CLK3-207ENST00000562389 DPPA2Q7Z7J5 298 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 MDP1Q86V88 176 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 SKA3Q8IX90 412 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 PIAS4Q8N2W9 510 aaPredicted RBP14.56□□□□□ -0.08
CLK3-207ENST00000562389 NSMAFQ92636 917 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 GTPBP3Q969Y2 492 aaKnown RBP14.56□□□□□ -0.08
CLK3-207ENST00000562389 NABP1Q96AH0 204 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 ERMAPQ96PL5 475 aaPredicted RBP14.56□□□□□ -0.08
CLK3-207ENST00000562389 FEVQ99581 238 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 NIPSNAP1Q9BPW8 284 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 IFT27Q9BW83 186 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 VSX1Q9NZR4 365 aaPredicted RBP14.56□□□□□ -0.08
CLK3-207ENST00000562389 PDP1Q9P0J1 537 aaPredicted RBP14.56□□□□□ -0.08
CLK3-207ENST00000562389 AP4S1Q9Y587 144 aa14.56□□□□□ -0.08
CLK3-207ENST00000562389 NOTCH2Q04721 2471 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 SOCS2O14508 198 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 IDH3BO43837 385 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 ATE1O95260 518 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 CECR9P0C854 216 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 CD79AP11912 226 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 CDH11P55287 796 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 ACTR3P61158 418 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 COX10Q12887 443 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 ATP6AP1Q15904 470 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 PTCHD4Q6ZW05 846 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 ZNF611Q8N823 705 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 FBXW5Q969U6 566 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 NRBF2Q96F24 287 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 ZNF75AQ96N20 296 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 SNX18Q96RF0 628 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 PLA2G12AQ9BZM1 189 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 SIAEQ9HAT2 523 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 NTN4Q9HB63 628 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 NOX3Q9HBY0 568 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 PLEKHA6Q9Y2H5 1048 aa14.55□□□□□ -0.08
CLK3-207ENST00000562389 DSCAMO60469 2012 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 CSMD2Q7Z408 3487 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 BHLHE40O14503 412 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 RAB36O95755 333 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 TP53P04637 393 aaPredicted RBP14.54□□□□□ -0.08
CLK3-207ENST00000562389 FCGR1AP12314 374 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 DNASE1P24855 282 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 FASP25445 335 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 CDAP32320 146 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 CDKN2AP42771 156 aaKnown RBP14.54□□□□□ -0.08
CLK3-207ENST00000562389 IDH3GP51553 393 aaPredicted RBP14.54□□□□□ -0.08
CLK3-207ENST00000562389 ARHGDIAP52565 204 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 NAAAQ02083 359 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 NPRL3Q12980 569 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 KEAP1Q14145 624 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 CLEC12AQ5QGZ9 265 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 SHQ1Q6PI26 577 aaKnown RBP14.54□□□□□ -0.08
CLK3-207ENST00000562389 SLC22A25Q6T423 547 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 MYPOPQ86VE0 399 aaPredicted RBP14.54□□□□□ -0.08
CLK3-207ENST00000562389 JAZF1Q86VZ6 243 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 DEPDC4Q8N2C3 294 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 OR8D4Q8NGM9 314 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 HTRA1Q92743 480 aa14.54□□□□□ -0.08
CLK3-207ENST00000562389 NEUROG1Q92886 237 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms