RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 DHHO43323 396 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 FZD7O75084 574 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 OR6A2O95222 327 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 THY1P04216 161 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 F13BP05160 661 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 IL6P05231 212 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 UMPSP11172 480 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 CLRN1P58418 232 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 ERVK-25P63136 954 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 HSF2Q03933 536 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 FMODQ06828 376 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 SLC9A3R2Q15599 337 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 PCGF3Q3KNV8 242 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 PDCD4Q53EL6 469 aaKnown RBP9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 RUNDC3AQ59EK9 446 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 PABPC1L2AQ5JQF8 200 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 GCNT6Q5T4J0 391 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 OTPQ5XKR4 325 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 RFPL4BQ6ZWI9 263 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 PIWIL3Q7Z3Z3 882 aaKnown RBP9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 RETREG3Q86VR2 466 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 HOMEZQ8IX15 550 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 OR5J2Q8NH18 312 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 DNAJA4Q8WW22 397 aaPredicted RBP9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 NSMAFQ92636 917 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 GTF2H4Q92759 462 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 ZNF566Q969W8 418 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 OR2J1Q9GZK6 312 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 POFUT1Q9H488 388 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 RMND5AQ9H871 391 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 NTN4Q9HB63 628 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 TMEM27Q9HBJ8 222 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 SLCO1C1Q9NYB5 712 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 TAS2R5Q9NYW4 299 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 PDP1Q9P0J1 537 aaPredicted RBP9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 PURGQ9UJV8 347 aaKnown RBP9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 NUP50Q9UKX7 468 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 AUP1Q9Y679 476 aa9.87□□□□□ -0.83
NSMCE1-202ENST00000561960 LOC100509620A0A075B734 347 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 IGKV1D-43A0A0B4J1Z2 117 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 LOC102725191A0A1B0GVB3 256 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 IQCMA0A1B0GVH7 501 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 UBOX5O94941 541 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 ZCCHC18P0CG32 403 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 PGA4P0DJD7 388 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 PGA3P0DJD8 388 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 PRKAR1BP31321 381 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 APLNRP35414 380 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 MMP15P51511 669 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 TXNL4AP83876 142 aaKnown RBP9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 CDK6Q00534 326 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 TEKQ02763 1124 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 ZNF154Q13106 437 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 NPTX1Q15818 432 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 DOK3Q7L591 496 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 NET1Q7Z628 596 aaPredicted RBP9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 PXKQ7Z7A4 578 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 KIR3DL3Q8N743 410 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 CLDN22Q8N7P3 220 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 LSMEM1Q8N8F7 131 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 SCAIQ8N9R8 606 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 OR4D11Q8NGI4 311 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 ABHD4Q8TB40 342 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 MCHR2Q969V1 340 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 ELMOD3Q96FG2 381 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 EPYCQ99645 322 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 MCHR1Q99705 422 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 BCL2L10Q9HD36 194 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 GPR160Q9UJ42 338 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 HAO1Q9UJM8 370 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 NBEAL2Q6ZNJ1 2754 aa9.86□□□□□ -0.83
NSMCE1-202ENST00000561960 BLOC1S5-TXNDC5H3BN57 136 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 TM9SF1O15321 606 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 HDAC3O15379 428 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 SHOX2O60902 331 aaPredicted RBP9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 FARS2O95363 451 aaKnown RBP9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 NGFP01138 241 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 THRBP10828 461 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 IDO1P14902 403 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 ZNF32P17041 273 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 HOXB9P17482 250 aaPredicted RBP9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 FUT1P19526 365 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 STOMP27105 288 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 GCH1P30793 250 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 PLP2Q04941 152 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 SCARB2Q14108 478 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 SGCAQ16586 387 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 SLC36A2Q495M3 483 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 PAGE3Q5JUK9 113 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 HHATQ5VTY9 493 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 FAM91A1Q658Y4 838 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 HIST2H2BDQ6DRA6 164 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 DHRS4L2Q6PKH6 230 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 BRD3OSQ6XYD6 125 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 RANBP3LQ86VV4 465 aaPredicted RBP9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 SNX32Q86XE0 403 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 TREML1Q86YW5 311 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 ARMC8Q8IUR7 673 aa9.85□□□□□ -0.83
NSMCE1-202ENST00000561960 TEX29Q8N6K0 151 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms