RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SELENOFO60613 162 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 NEURL1O76050 574 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 SNX4O95219 450 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ABHD16AO95870 558 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 MRPL3P09001 348 aaKnown RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 OR2T7P0C7T2 308 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 C1QTNF9P0C862 333 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF17P17021 662 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 FSTP19883 344 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 KLK2P20151 261 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 DPP4P27487 766 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 FGF9P31371 208 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 GABRA5P31644 462 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 PTGS2P35354 604 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ENTPD1P49961 510 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 BMXP51813 675 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF41P51814 821 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 DSCR4P56555 118 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 SOX8P57073 446 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 OR12D2P58182 307 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 LCN6P62502 163 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ACTC1P68032 377 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ACTA1P68133 377 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 H3F3AP84243 136 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 FABP5Q01469 135 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 LGALS3BPQ08380 585 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 PUDPQ08623 228 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 MYBPHQ13203 477 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 SELENBP1Q13228 472 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 PON3Q15166 354 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 OR7A5Q15622 319 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 MOGQ16653 247 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 TIMM50Q3ZCQ8 353 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 GLYR1Q49A26 553 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 LCN1P1Q5VSP4 162 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 DMKNQ6E0U4 476 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 C3orf33Q6P1S2 294 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 UNQ6494/PRO21346Q6UXR6 183 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 TMEM91Q6ZNR0 172 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 USP43Q70EL4 1123 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 H1FNTQ75WM6 255 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ADCK1Q86TW2 530 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 CDC20BQ86Y33 519 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 KLBQ86Z14 1044 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 SLC35F2Q8IXU6 374 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 GHDCQ8N2G8 530 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 SYS1Q8N2H4 156 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 MFSD4AQ8N468 514 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 TMEM156Q8N614 296 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ZFP41Q8N8Y5 198 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 OR10H4Q8NGA5 316 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 OR6Q1Q8NGQ2 317 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 OR2T27Q8NH04 317 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ASB10Q8WXI3 467 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 MIB2Q96AX9 1013 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 DDIT4LQ96D03 193 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ZHX1-C8orf76Q96EF9 292 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 THOC3Q96J01 351 aaKnown RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 GNRHR2Q96P88 292 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 IP6K3Q96PC2 410 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 CNN2Q99439 309 aaKnown RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 TBX5Q99593 518 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ALG12Q9BV10 488 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 BARHL1Q9BZE3 327 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 CCDC86Q9H6F5 360 aaKnown RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 AKIP1Q9NQ31 210 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 RPRD1BQ9NQG5 326 aaKnown RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 TXNL4BQ9NX01 149 aaKnown RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 CHCHD3Q9NX63 227 aaKnown RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 ALKBH4Q9NXW9 302 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 CCDC59Q9P031 241 aaKnown RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 B9D1Q9UPM9 204 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 TRAPPC4Q9Y296 219 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 B3GALT5Q9Y2C3 310 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 KLHDC2Q9Y2U9 406 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 MRPS18CQ9Y3D5 142 aaKnown RBP5.84□□□□□ -1.47
CAPN3-210ENST00000561817 HDGFL3Q9Y3E1 203 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 FKBP7Q9Y680 259 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 A3GALT2U3KPV4 340 aa5.84□□□□□ -1.47
CAPN3-210ENST00000561817 FREM3P0C091 2139 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 IGKV1D-43A0A0B4J1Z2 117 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 LOC100506127A0A0U1RQW1 187 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 DAPL1A0PJW8 107 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 SHISA3A0PJX4 238 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 OR2M5A3KFT3 312 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 FAM171A2A8MVW0 826 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 H3BML4 177 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 DVL2O14641 736 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 MAGEB4O15481 346 aaPredicted RBP5.83□□□□□ -1.48
CAPN3-210ENST00000561817 ARHGEF9O43307 516 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 RNF13O43567 381 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 PLPP2O43688 288 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 TRAF3IP2O43734 574 aaPredicted RBP5.83□□□□□ -1.48
CAPN3-210ENST00000561817 AKAP8O43823 692 aaKnown RBP5.83□□□□□ -1.48
CAPN3-210ENST00000561817 RAMP1O60894 148 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 CBR3O75828 277 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 SC5DO75845 299 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 AKR7A3O95154 331 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 PMS2P2O95744 297 aa5.83□□□□□ -1.48
CAPN3-210ENST00000561817 MT-ND5P03915 603 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms