RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	ZNF99	A8MXY4	864 aa	Predicted RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431		E9PAM4	449 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	TEX46	H3BTG2	121 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	DLGAP1	O14490	977 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	DYNC1I1	O14576	645 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	CDX4	O14627	284 aa	Predicted RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	RAB29	O14966	203 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZSCAN12	O43309	604 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	NDUFA2	O43678	99 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	PCDH7	O60245	1069 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR10H3	O60404	316 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	PSIP1	O75475	530 aa	Known RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZMPSTE24	O75844	475 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	SYNGR4	O95473	234 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	NADK	O95544	446 aa	Predicted RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	GSR	P00390	522 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	CHRNG	P07510	517 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	COX5B	P10606	129 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	B4GALT1	P15291	398 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	STOM	P27105	288 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	TEAD1	P28347	426 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	MAS1L	P35410	378 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	MMP12	P39900	470 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	DCT	P40126	519 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	SLC26A3	P40879	764 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	CRYBB2	P43320	205 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	CAPZB	P47756	277 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	ALDH3B2	P48448	385 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	MRPL19	P49406	292 aa	Known RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	STK19	P49842	368 aa	Predicted RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	ATP5J2	P56134	94 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	SPCS3	P61009	180 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	HERV-K104	P61576	105 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	RPS14	P62263	151 aa	Known RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	PITPNA	Q00169	270 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	OGDH	Q02218	1023 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZNF33A	Q06730	810 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	MADCAM1	Q13477	382 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	FASTKD3	Q14CZ7	662 aa	Known RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	NPTX1	Q15818	432 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	RBBP7	Q16576	425 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZSWIM7	Q19AV6	140 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	CTU2	Q2VPK5	515 aa	Known RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	NDUFAF6	Q330K2	333 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	GTDC1	Q4AE62	458 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	CMPK2	Q5EBM0	449 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	C9orf64	Q5T6V5	341 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZNF691	Q5VV52	312 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	LIPN	Q5VXI9	398 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	WDR59	Q6PJI9	974 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	SIGLEC15	Q6ZMC9	328 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	ZNF571	Q7Z3V5	609 aa	Predicted RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	AMIGO1	Q86WK6	493 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	CATSPERD	Q86XM0	798 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	TRAM1L1	Q8N609	369 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	MAPKAPK5-AS1	Q8N8E1	139 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	FBXO36	Q8NEA4	188 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR4D6	Q8NGJ1	314 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR9G4	Q8NGQ1	327 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	DTD1	Q8TEA8	209 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	FCAMR	Q8WWV6	532 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	RXFP2	Q8WXD0	754 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	FAM131C	Q96AQ9	280 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	TGM7	Q96PF1	710 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	PSMB7	Q99436	277 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	AGPAT1	Q99943	283 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	KRTAP4-4	Q9BYR3	166 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	WDR54	Q9H977	334 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	LPAR2	Q9HBW0	351 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	SLC52A3	Q9NQ40	469 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	C12orf4	Q9NQ89	552 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	OR2S2	Q9NQN1	319 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	ABCB10	Q9NRK6	738 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	UFSP2	Q9NUQ7	469 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	EXD2	Q9NVH0	621 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	LYAR	Q9NX58	379 aa	Known RBP	3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	PTTG3P	Q9NZH4	202 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	P2RX2	Q9UBL9	471 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	LCMT1	Q9UIC8	334 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	C3orf18	Q9UK00	162 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	ERVW-1	Q9UQF0	538 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	TCF19	Q9Y242	345 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	HS3ST2	Q9Y278	367 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	HYOU1	Q9Y4L1	999 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	FADS3	Q9Y5Q0	445 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	AUP1	Q9Y679	476 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	URGCP-MRPS24	S4R325	110 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431	FAM186A	A6NE01	2351 aa		3.53	□□□□□ -1.84
LRRC28-222	ENST00000561431		A0A0D9SEW6	157 aa		3.52	□□□□□ -1.85
LRRC28-222	ENST00000561431	FRG2C	A6NGY1	282 aa		3.52	□□□□□ -1.85
LRRC28-222	ENST00000561431	SIGLEC16	A6NMB1	481 aa		3.52	□□□□□ -1.85
LRRC28-222	ENST00000561431		E9PQ18	207 aa		3.52	□□□□□ -1.85
LRRC28-222	ENST00000561431	BLOC1S5-TXNDC5	H3BN57	136 aa		3.52	□□□□□ -1.85
LRRC28-222	ENST00000561431	BTN3A3	O00478	584 aa		3.52	□□□□□ -1.85
LRRC28-222	ENST00000561431	BIRC5	O15392	142 aa		3.52	□□□□□ -1.85
LRRC28-222	ENST00000561431	STX7	O15400	261 aa	Known RBP	3.52	□□□□□ -1.85
LRRC28-222	ENST00000561431	SNAP91	O60641	907 aa		3.52	□□□□□ -1.85
LRRC28-222	ENST00000561431	GMNN	O75496	209 aa		3.52	□□□□□ -1.85
LRRC28-222	ENST00000561431	CLDN11	O75508	207 aa		3.52	□□□□□ -1.85
LRRC28-222	ENST00000561431	TRMU	O75648	421 aa	Known RBP	3.52	□□□□□ -1.85

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