RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 DPPA2Q7Z7J5 298 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 AMIGO2Q86SJ2 522 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 ZDHHC13Q8IUH4 622 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 HS3ST5Q8IZT8 346 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 PARP8Q8N3A8 854 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 SYT14Q8NB59 555 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 OR52L1Q8NGH7 329 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 RASD2Q96D21 266 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 TMEM204Q9BSN7 226 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 WACQ9BTA9 647 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 IFT27Q9BW83 186 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 PLA2G12AQ9BZM1 189 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 ZNF556Q9HAH1 456 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 S100A14Q9HCY8 104 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 TMEM38BQ9NVV0 291 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 B3GNT2Q9NY97 397 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 IL20RAQ9UHF4 553 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 POFUT2Q9Y2G5 429 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 UGT2A1Q9Y4X1 527 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 LRBAP50851 2863 aa8.42□□□□□ -1.06
RABGGTA-221ENST00000561055 AKAP6Q13023 2319 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 ARFGEF3Q5TH69 2177 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 IGKV1D-43A0A0B4J1Z2 117 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 SOCS2O14508 198 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 IGKV3-15P01624 115 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 IGLV1-44P01699 117 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 OR8G3PP0DMU2 310 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 PRF1P14222 555 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 CBR1P16152 277 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 HIST1H1CP16403 213 aaKnown RBP8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 CDH2P19022 906 aaPredicted RBP8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 NPR2P20594 1047 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 PTAFRP25105 342 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 HOXC12P31275 282 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 GIPRP48546 466 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 DAPP51397 102 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 ESRRGP62508 458 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 CDK5Q00535 292 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 TLE4Q04727 773 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 FMODQ06828 376 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 CD47Q08722 323 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 HIKESHIQ53FT3 197 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 NCMAPQ5T1S8 102 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 FAM27BQ5VT28 67 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 ADAM5Q6NVV9 412 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 KLHL24Q6TFL4 600 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 ZNF813Q6ZN06 617 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 PTCHD4Q6ZW05 846 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 ZBTB46Q86UZ6 589 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 SLC22A24Q8N4F4 322 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 NPEPL1Q8NDH3 523 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 OR4Q3Q8NH05 313 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 OR52N5Q8NH56 324 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 NABP1Q96AH0 204 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 ZC3HAV1LQ96H79 300 aaKnown RBP8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 ZNF75AQ96N20 296 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 PKP2Q99959 881 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 TSSK6Q9BXA6 273 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 SIAEQ9HAT2 523 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 ZNF224Q9NZL3 707 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 NPAP1Q9NZP6 1156 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 TACC2O95359 2948 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 ABCA12Q86UK0 2595 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 NOTCH2Q04721 2471 aa8.41□□□□□ -1.06
RABGGTA-221ENST00000561055 ANKRD17O75179 2603 aaKnown RBP8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 SPG11Q96JI7 2443 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 DPRXA6NFQ7 191 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 SLC2A10O95528 541 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 IGFBP1P08833 259 aaPredicted RBP8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 CTLA4P16410 223 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 ZNF23P17027 643 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 CRABP1P29762 137 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 GRK5P34947 590 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 ARR3P36575 388 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 UBE2NP61088 152 aaKnown RBP8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 PPP2R2BQ00005 443 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 MYBPC1Q00872 1141 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 KCNMB1Q16558 191 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 SLC36A3Q495N2 470 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 SLC27A4Q6P1M0 643 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 SYT9Q86SS6 491 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 WFDC8Q8IUA0 241 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 SKA3Q8IX90 412 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 PQLC1Q8N2U9 271 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 ATG16L2Q8NAA4 619 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 OR2T33Q8NG76 320 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 TEX47Q8TBZ9 253 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 RADILQ96JH8 1075 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 NMNAT3Q96T66 252 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 NUAK2Q9H093 628 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 SYT4Q9H2B2 425 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 SEMA6AQ9H2E6 1030 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 ESRP2Q9H6T0 727 aaKnown RBP8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 SLC25A19Q9HC21 320 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 PAPOLBQ9NRJ5 636 aaKnown RBP8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 CMC2Q9NRP2 79 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 TBC1D23Q9NUY8 699 aa8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 TMEFF2Q9UIK5 374 aaPredicted RBP8.4□□□□□ -1.06
RABGGTA-221ENST00000561055 KLHL21Q9UJP4 597 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms