RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 SYT14Q8NB59 555 aa13.9□□□□□ -0.18
SNX1-213ENST00000561026 TMEM239Q8WW34 195 aa13.9□□□□□ -0.18
SNX1-213ENST00000561026 LIPHQ8WWY8 451 aa13.9□□□□□ -0.18
SNX1-213ENST00000561026 ASB10Q8WXI3 467 aa13.9□□□□□ -0.18
SNX1-213ENST00000561026 SGTBQ96EQ0 304 aa13.9□□□□□ -0.18
SNX1-213ENST00000561026 ZNF583Q96ND8 569 aa13.9□□□□□ -0.18
SNX1-213ENST00000561026 C1orf198Q9H425 327 aa13.9□□□□□ -0.18
SNX1-213ENST00000561026 INIPQ9NRY2 104 aa13.9□□□□□ -0.18
SNX1-213ENST00000561026 ARGLU1Q9NWB6 273 aaPredicted RBP13.9□□□□□ -0.18
SNX1-213ENST00000561026 ZNF346Q9UL40 294 aaKnown RBP13.9□□□□□ -0.18
SNX1-213ENST00000561026 MCIDASD6RGH6 385 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 MRASO14807 208 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 MGRN1O60291 552 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 TRMUO75648 421 aaKnown RBP13.89□□□□□ -0.19
SNX1-213ENST00000561026 SNAP29O95721 258 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 PTHP01270 115 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 IFNA14P01570 189 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 TSPAN19P0C672 248 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 ZNF250P15622 560 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 ACADSP16219 412 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 GPR6P46095 362 aaPredicted RBP13.89□□□□□ -0.19
SNX1-213ENST00000561026 OR1E2P47887 323 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 DAP3P51398 398 aaKnown RBP13.89□□□□□ -0.19
SNX1-213ENST00000561026 ZNF84P51523 738 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 ZNF133P52736 654 aaPredicted RBP13.89□□□□□ -0.19
SNX1-213ENST00000561026 TMEM33P57088 247 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 SELENOVP59797 346 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 MYBPC1Q00872 1141 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 KLF10Q13118 480 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 HDDC2Q7Z4H3 204 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 RBM15BQ8NDT2 890 aaKnown RBP13.89□□□□□ -0.19
SNX1-213ENST00000561026 NOXO1Q8NFA2 376 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 C10orf82Q8WW14 230 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 C19orf24Q9BVV8 132 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 RACGAP1Q9H0H5 632 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 CDH20Q9HBT6 801 aa13.89□□□□□ -0.19
SNX1-213ENST00000561026 IGLV3-9A0A075B6K5 115 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 BBIP1A8MTZ0 92 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 B4DSR2 109 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 CLPTM1O96005 669 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 MMP7P09237 267 aaPredicted RBP13.88□□□□□ -0.19
SNX1-213ENST00000561026 THRBP10828 461 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 RAD52P43351 418 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 DVL1P1P54792 670 aaPredicted RBP13.88□□□□□ -0.19
SNX1-213ENST00000561026 UCP2P55851 309 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 PLP2Q04941 152 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 NKPD1Q17RQ9 610 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 TBC1D28Q2M2D7 210 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 C10orf128Q5T292 105 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 ARMC4Q5T2S8 1044 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 LIPNQ5VXI9 398 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 LRRC18Q8N456 261 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 OR1J2Q8NGS2 313 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 MOSPD2Q8NHP6 518 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 ZNF519Q8TB69 540 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 SYNPRQ8TBG9 265 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 YIPF5Q969M3 257 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 LRMDAQ9H2I8 198 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 OR51B6Q9H340 312 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 SIAEQ9HAT2 523 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 SAR1AQ9NR31 198 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 ZNF275Q9NSD4 429 aaPredicted RBP13.88□□□□□ -0.19
SNX1-213ENST00000561026 TAAR3PQ9P1P4 343 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 STX18Q9P2W9 335 aaKnown RBP13.88□□□□□ -0.19
SNX1-213ENST00000561026 GPR160Q9UJ42 338 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 MED31Q9Y3C7 131 aa13.88□□□□□ -0.19
SNX1-213ENST00000561026 LOC100653049A0A140TA62 436 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 IQCMA0A1B0GVH7 501 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 SASH3O75995 380 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 KRT34O76011 436 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 NCR1O76036 304 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 LCKP06239 509 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 TROVE2P10155 538 aaKnown RBP eCLIP13.87□□□□□ -0.19
SNX1-213ENST00000561026 KDELR2P33947 212 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 ARFIP2P53365 341 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 KLF3P57682 345 aaPredicted RBP13.87□□□□□ -0.19
SNX1-213ENST00000561026 MRPS34P82930 218 aaKnown RBP13.87□□□□□ -0.19
SNX1-213ENST00000561026 LAPTM4AQ15012 233 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 MAPRE2Q15555 327 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 ALKBH6Q3KRA9 238 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 CYBRD1Q53TN4 286 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 CLDND2Q8NHS1 167 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 C11orf40Q8WZ69 217 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 NMD3Q96D46 503 aaKnown RBP13.87□□□□□ -0.19
SNX1-213ENST00000561026 TSPAN32Q96QS1 320 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 ZNF416Q9BWM5 594 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 BCL2L14Q9BZR8 327 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 SMURF2Q9HAU4 748 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 HINT3Q9NQE9 182 aaKnown RBP13.87□□□□□ -0.19
SNX1-213ENST00000561026 SLCO1C1Q9NYB5 712 aa13.87□□□□□ -0.19
SNX1-213ENST00000561026 NPIPB13A6NJU9 1138 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 C17orf100A8MU93 164 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 NPIPB4C9JG80 1138 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 WNT9BO14905 357 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 RP2O75695 350 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 SLC2A10O95528 541 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 SAGP10523 405 aaPredicted RBP13.86□□□□□ -0.19
SNX1-213ENST00000561026 PCMT1P22061 227 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 CDAP32320 146 aa13.86□□□□□ -0.19
SNX1-213ENST00000561026 SRP14P37108 136 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms