RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ACAA2P42765 397 aaKnown RBP14.96□□□□□ -0.01
TPM1-228ENST00000560975 ACTBP60709 375 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 RAB5BP61020 215 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 ACTG1P63261 375 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 SREBF2Q12772 1141 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 RAB11BQ15907 218 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 VWA2Q5GFL6 755 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 VN1R4Q7Z5H5 301 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 TCEAL3Q969E4 200 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 MKKSQ9NPJ1 570 aaPredicted RBP14.96□□□□□ -0.01
TPM1-228ENST00000560975 PRRT4C9JH25 899 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 FGF18O76093 207 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 ABOP16442 354 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 PEA15Q15121 130 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 GFOD2Q3B7J2 385 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 NKAPLQ5M9Q1 402 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 DPY19L2P2Q6ZN68 376 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 PGAP1Q75T13 922 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 OR6N2Q8NGY6 317 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 OR2G2Q8NGZ5 317 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 PHOSPHO1Q8TCT1 267 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 SMARCD2Q92925 531 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 TRIM43Q96BQ3 446 aaPredicted RBP14.96□□□□□ -0.01
TPM1-228ENST00000560975 SLC6A7Q99884 636 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 SLC25A21Q9BQT8 299 aaPredicted RBP14.96□□□□□ -0.01
TPM1-228ENST00000560975 COMMD4Q9H0A8 199 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 MBNL1Q9NR56 388 aaKnown RBP14.96□□□□□ -0.01
TPM1-228ENST00000560975 MSRAQ9UJ68 235 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 TINAGQ9UJW2 476 aa14.96□□□□□ -0.01
TPM1-228ENST00000560975 ARID1AO14497 2285 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 OR4C45A6NMZ5 311 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 DCTN6O00399 190 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 FGF16O43320 207 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 ZNF208O43345 1280 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 SSX5O60225 188 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 BRINP1O60477 761 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 PQBP1O60828 265 aaKnown RBP14.95□□□□□ -0.02
TPM1-228ENST00000560975 TMEM127O75204 238 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 S100A6P06703 90 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 VAMP1P23763 118 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 AIMP2Q13155 320 aaKnown RBP14.95□□□□□ -0.02
TPM1-228ENST00000560975 PPP1R1AQ13522 171 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 FAM53BQ14153 422 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 SLC35D3Q5M8T2 416 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 LRRC69Q6ZNQ3 347 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 C10orf53Q8N6V4 93 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 ELP5Q8TE02 316 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 ZNF426Q9BUY5 554 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 NMNAT2Q9BZQ4 307 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 VSIG4Q9Y279 399 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 ZNF736B4DX44 427 aaPredicted RBP14.95□□□□□ -0.02
TPM1-228ENST00000560975 NDUFS6O75380 124 aaKnown RBP14.95□□□□□ -0.02
TPM1-228ENST00000560975 CYB5AP00167 134 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 CT62P0C5K7 136 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 PPT1P50897 306 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 C10orf91Q5T1B1 145 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 NAA40Q86UY6 237 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 JAZF1Q86VZ6 243 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 CDRT4Q8N9R6 151 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 OR4N2Q8NGD1 307 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 OR13C8Q8NGS7 320 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 GPR148Q8TDV2 347 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 DCUN1D4Q92564 292 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 ZNF251Q9BRH9 671 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 LMAN2LQ9H0V9 348 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 LAMP5Q9UJQ1 280 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 C5orf51A6NDU8 294 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 CMPK1P30085 196 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 HAAOP46952 286 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 OR10K2Q6IF99 312 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 ADAMTSL4Q6UY14 1074 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 DPY19L4Q7Z388 723 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 KREMEN2Q8NCW0 462 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 OR4E2Q8NGC2 313 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 EDAQ92838 391 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 PPP1R14AQ96A00 147 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 C3orf49Q96BT1 292 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 PIK3IP1Q96FE7 263 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 TRIM2Q9C040 744 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 CST11Q9H112 138 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 SEMA6CQ9H3T2 930 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 DNAJB12Q9NXW2 375 aaKnown RBP14.95□□□□□ -0.02
TPM1-228ENST00000560975 MIOXQ9UGB7 285 aa14.95□□□□□ -0.02
TPM1-228ENST00000560975 TRBV5-7A0A0A0MS05 114 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 LOC100289279A0A1B0GTE1 492 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 FITM1A5D6W6 292 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 C1QTNF3-AMACRE9PGA6 284 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 AGPAT2O15120 278 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 FHL5Q5TD97 284 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 SLC16A9Q7RTY1 509 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 FAM219AQ8IW50 185 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 PRSS35Q8N3Z0 413 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 STOML3Q8TAV4 291 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 NUBPLQ8TB37 319 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 NKD1Q969G9 470 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 GAL3ST3Q96A11 431 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 C14orf79Q96F83 325 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 FOXN4Q96NZ1 517 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 SEC11CQ9BY50 192 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 DUSP22Q9NRW4 184 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms