RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 TEX30Q5JUR7 227 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 LIPNQ5VXI9 398 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 TMEM225Q6GV28 225 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 C16orf87Q6PH81 154 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 ASB18Q6ZVZ8 466 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 BTLAQ7Z6A9 289 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 ZNF454Q8N9F8 522 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 SLC26A10Q8NG04 563 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 AP3S1Q92572 193 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 SLC25A44Q96H78 314 aaPredicted RBP11.53□□□□□ -0.56
SNX1-211ENST00000560829 WDFY2Q96P53 400 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 RBP7Q96R05 134 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 KCNS3Q9BQ31 491 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 QPCTLQ9NXS2 382 aa11.53□□□□□ -0.56
SNX1-211ENST00000560829 IGKV1D-43A0A0B4J1Z2 117 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 A0A0J9YW62 118 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 PINLYPA6NC86 204 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 CTDSP2O14595 271 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 RAMP1O60894 148 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 GATBO75879 557 aaKnown RBP11.52□□□□□ -0.57
SNX1-211ENST00000560829 HLA-DQA2P01906 255 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 PGA4P0DJD7 388 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 PGA3P0DJD8 388 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 OR8G3PP0DMU2 310 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 ZNF43P17038 809 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 CFL1P23528 166 aaKnown RBP11.52□□□□□ -0.57
SNX1-211ENST00000560829 PSMB10P40306 273 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 AGFG1P52594 562 aaKnown RBP11.52□□□□□ -0.57
SNX1-211ENST00000560829 NANOS3P60323 173 aaKnown RBP11.52□□□□□ -0.57
SNX1-211ENST00000560829 GPR85P60893 370 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 FMODQ06828 376 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 ACSM3Q53FZ2 586 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 THEM4Q5T1C6 240 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 SLC18B1Q6NT16 456 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 UNQ9370/PRO34162Q6UXP9 181 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 FAM83FQ8NEG4 500 aaPredicted RBP11.52□□□□□ -0.57
SNX1-211ENST00000560829 NOXO1Q8NFA2 376 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 OR2M7Q8NG81 312 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 OR14L1PQ8NHC6 308 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 FNDC8Q8TC99 324 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 PHYHIPQ92561 330 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 SIGLEC12Q96PQ1 595 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 OR8B4Q96RC9 309 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 TTYH2Q9BSA4 534 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 NAA11Q9BSU3 229 aaPredicted RBP11.52□□□□□ -0.57
SNX1-211ENST00000560829 PPIL3Q9H2H8 161 aaKnown RBP11.52□□□□□ -0.57
SNX1-211ENST00000560829 KLHL9Q9P2J3 617 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 KCNG2Q9UJ96 466 aa11.52□□□□□ -0.57
SNX1-211ENST00000560829 LINC01387J3KSC0 135 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 WDPCPO95876 746 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 IGHG1P01857 330 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 RPS27P42677 84 aaKnown RBP11.51□□□□□ -0.57
SNX1-211ENST00000560829 CD97P48960 835 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 ADAM8P78325 824 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 OR1C1Q15619 314 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 HIST3H3Q16695 136 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 ZMAT1Q5H9K5 638 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 FDX2Q6P4F2 183 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 CEACAM19Q7Z692 300 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 YRDCQ86U90 279 aaKnown RBP11.51□□□□□ -0.57
SNX1-211ENST00000560829 GPAT4Q86UL3 456 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 TPRA1Q86W33 373 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 GALNT16Q8N428 558 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 YIPF7Q8N8F6 280 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 THEM6Q8WUY1 208 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 MAP6Q96JE9 813 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 AMELYQ99218 206 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 EMC6Q9BV81 110 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 OCEL1Q9H607 264 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 PSMD9O00233 223 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 AQP8O94778 261 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 UCHL1P09936 223 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 KLK2P20151 261 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 CALRP27797 417 aaKnown RBP11.51□□□□□ -0.57
SNX1-211ENST00000560829 TNFSF8P32971 234 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 NOVA1P51513 510 aaKnown RBP11.51□□□□□ -0.57
SNX1-211ENST00000560829 RRADP55042 308 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 GFRA1P56159 465 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 RAC3P60763 192 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 ALKBH1Q13686 389 aaKnown RBP11.51□□□□□ -0.57
SNX1-211ENST00000560829 TOMM20Q15388 145 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 YIF1BQ5BJH7 314 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 GGNQ86UU5 652 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 GLB1L2Q8IW92 636 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 ZNF679Q8IYX0 411 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 ADGRG7Q96K78 797 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 RNF32Q9H0A6 362 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 SLCO1C1Q9NYB5 712 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 IKZF2Q9UKS7 526 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 ZNF281Q9Y2X9 895 aa11.51□□□□□ -0.57
SNX1-211ENST00000560829 AHCTF1Q8WYP5 2266 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 TRAV1-2A0A0B4J238 106 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 ARL6IP5O75915 188 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 ZFPL1O95159 310 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 F10P00742 488 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 SPARCP09486 303 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 ZNF12P17014 697 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 MYL9P24844 172 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 SLC17A1Q14916 467 aa11.5□□□□□ -0.57
SNX1-211ENST00000560829 MEP1BQ16820 701 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms