RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 A0A1B0GX12 115 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 ZNF724A8MTY0 619 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 B9A039 149 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 CHP2O43745 196 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 LYPD3O95274 346 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 BCL10O95999 233 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 CSTAP01040 98 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 PRKACGP22612 351 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 HTR2AP28223 471 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 SHC1P29353 583 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 RYKP34925 604 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 SERPINF1P36955 418 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 RBM34P42696 430 aaKnown RBP8.08□□□□□ -1.12
SMAD3-215ENST00000560424 YAP1P46937 504 aaKnown RBP8.08□□□□□ -1.12
SMAD3-215ENST00000560424 RAC3P60763 192 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 ESRRGP62508 458 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 SKP2Q13309 424 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 PDK3Q15120 406 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 PGBD2Q6P3X8 592 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 APOOLQ6UXV4 268 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 BPIFB2Q8N4F0 458 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 ATG16L2Q8NAA4 619 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 POC1BQ8TC44 478 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 FBLIM1Q8WUP2 373 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 NEU4Q8WWR8 484 aaPredicted RBP8.08□□□□□ -1.12
SMAD3-215ENST00000560424 CNOT9Q92600 299 aaKnown RBP8.08□□□□□ -1.12
SMAD3-215ENST00000560424 TMEM186Q96B77 213 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 APH1AQ96BI3 265 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 SLC41A3Q96GZ6 507 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 MBOAT4Q96T53 435 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 YTHDF1Q9BYJ9 559 aaKnown RBP8.08□□□□□ -1.12
SMAD3-215ENST00000560424 LAT2Q9GZY6 243 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 ZNF556Q9HAH1 456 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 TMEM27Q9HBJ8 222 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 LPAR2Q9HBW0 351 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 PAPOLBQ9NRJ5 636 aaKnown RBP8.08□□□□□ -1.12
SMAD3-215ENST00000560424 DDX28Q9NUL7 540 aaKnown RBP8.08□□□□□ -1.12
SMAD3-215ENST00000560424 KIF17Q9P2E2 1029 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 NDRG4Q9ULP0 352 aaKnown RBP8.08□□□□□ -1.12
SMAD3-215ENST00000560424 MOKQ9UQ07 419 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 AMDHD2Q9Y303 409 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 NOSIPQ9Y314 301 aaKnown RBP8.08□□□□□ -1.12
SMAD3-215ENST00000560424 PKD1L1Q8TDX9 2849 aa8.08□□□□□ -1.12
SMAD3-215ENST00000560424 ARFGEF3Q5TH69 2177 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 A0A087WUU8 490 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 LOC100130705A0A1B0GUX0 176 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 VSTM5A8MXK1 200 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 ZNF264O43296 627 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 FRS3O43559 492 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 CYTIPO60759 359 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 LILRA1O75019 489 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 BCAS1O75363 584 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-215ENST00000560424 ALX3O95076 343 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 WNT11O96014 354 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 THY1P04216 161 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 UBL4AP11441 157 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 GSTM3P21266 225 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 GIFP27352 417 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 SLC1A3P43003 542 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 IDH3GP51553 393 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-215ENST00000560424 SUMO3P55854 103 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-215ENST00000560424 TEKQ02763 1124 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 PPP1R8Q12972 351 aaKnown RBP8.07□□□□□ -1.12
SMAD3-215ENST00000560424 NPRL3Q12980 569 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 SELENBP1Q13228 472 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 SEC23BQ15437 767 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 OR1Q1Q15612 314 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 MST1LQ2TV78 715 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 FGD3Q5JSP0 725 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 FAHD2BQ6P2I3 314 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-215ENST00000560424 ULK3Q6PHR2 472 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 VHLLQ6RSH7 139 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 LINC00114Q6XXX2 140 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 MBOAT2Q6ZWT7 520 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 HMGN2P46Q86SG4 172 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 CLDN22Q8N7P3 220 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 AQP11Q8NBQ7 271 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 SETD9Q8NE22 299 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 ZNF555Q8NEP9 628 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 OR4K5Q8NGD3 323 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 OR52J3Q8NH60 311 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 DNAJA4Q8WW22 397 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-215ENST00000560424 FAHD2AQ96GK7 314 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 HRASLS5Q96KN8 279 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 NIPSNAP1Q9BPW8 284 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 PRSS27Q9BQR3 290 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 SLC19A3Q9BZV2 496 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 KRCC1Q9NPI7 259 aaPredicted RBP8.07□□□□□ -1.12
SMAD3-215ENST00000560424 UBAP1Q9NZ09 502 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 RHCGQ9UBD6 479 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 UPB1Q9UBR1 384 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 SPEF1Q9Y4P9 236 aa8.07□□□□□ -1.12
SMAD3-215ENST00000560424 A0A1W2PNR3 127 aa8.06□□□□□ -1.12
SMAD3-215ENST00000560424 MAGEA13PA6NCF6 341 aa8.06□□□□□ -1.12
SMAD3-215ENST00000560424 CPSF4LA6NMK7 179 aaKnown RBP8.06□□□□□ -1.12
SMAD3-215ENST00000560424 ETV2O00321 342 aaPredicted RBP8.06□□□□□ -1.12
SMAD3-215ENST00000560424 OR10H3O60404 316 aa8.06□□□□□ -1.12
SMAD3-215ENST00000560424 MRPL33O75394 65 aaKnown RBP8.06□□□□□ -1.12
SMAD3-215ENST00000560424 TNFAIP8O95379 198 aa8.06□□□□□ -1.12
SMAD3-215ENST00000560424 GASTP01350 101 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms