RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ZNF347Q96SE7 839 aa13.15□□□□□ -0.3
SNRPA1-210ENST00000560383 KCNK17Q96T54 332 aa13.15□□□□□ -0.3
SNRPA1-210ENST00000560383 RHNO1Q9BSD3 238 aa13.15□□□□□ -0.3
SNRPA1-210ENST00000560383 FUZQ9BT04 418 aa13.15□□□□□ -0.3
SNRPA1-210ENST00000560383 SMURF2Q9HAU4 748 aa13.15□□□□□ -0.3
SNRPA1-210ENST00000560383 CA10Q9NS85 328 aa13.15□□□□□ -0.3
SNRPA1-210ENST00000560383 ADAM21Q9UKJ8 722 aa13.15□□□□□ -0.3
SNRPA1-210ENST00000560383 TMEM5Q9Y2B1 443 aa13.15□□□□□ -0.3
SNRPA1-210ENST00000560383 FAM32AQ9Y421 112 aaKnown RBP13.15□□□□□ -0.3
SNRPA1-210ENST00000560383 TRAV27A0A087WT01 109 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 IGHV2OR16-5A0A0B4J2B6 119 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 B2RBV5 119 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 CDC42EP2O14613 210 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 SSX4O60224 188 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 UBL3O95164 117 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 OR8G3PP0DMU2 310 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 T-ENOLP0DO92 83 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 BMP4P12644 408 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 ITGA2P17301 1181 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 CAPZA2P47755 286 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 LIMS1P48059 325 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 CLRN1P58418 232 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 RPL27P61353 136 aaKnown RBP13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 RAB1AP62820 205 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 FAM205BPQ63HN1 556 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 PODNL1Q6PEZ8 512 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 CLEC2AQ6UVW9 174 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 DPPA2Q7Z7J5 298 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 OAFQ86UD1 273 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 CDK20Q8IZL9 346 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 ARHGAP24Q8N264 748 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 OR10H5Q8NGA6 315 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 OR13C2Q8NGS9 318 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 OR51A7Q8NH64 312 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 ALG12Q9BV10 488 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 ZNF442Q9H7R0 627 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 FBXL3Q9UKT7 428 aa13.14□□□□□ -0.31
SNRPA1-210ENST00000560383 A0A096LNT2 108 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 hCG_2039718K7EN88 272 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 PTP4A3O75365 173 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 CD79AP11912 226 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 NR2C1P13056 603 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 ZNF35P13682 527 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 ZNF26P17031 533 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 CALB2P22676 271 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 SERPINF1P36955 418 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 OMPP47874 163 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 GIPRP48546 466 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 CTXN1P60606 82 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 MXRA7P84157 204 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 CHRNB3Q05901 458 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 NPRL3Q12980 569 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 EFNB3Q15768 340 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 ADIPOQQ15848 244 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 ZBED5Q49AG3 693 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 RRM2BQ7LG56 351 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 MEX3DQ86XN8 651 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 SYT14Q8NB59 555 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 FGFBP3Q8TAT2 258 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 ZNF519Q8TB69 540 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 FNDC8Q8TC99 324 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 IL1RAPQ9NPH3 570 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 ACTR3BQ9P1U1 418 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 ZNF346Q9UL40 294 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 BOLA1Q9Y3E2 137 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 UGT2A1Q9Y4X1 527 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 COL6A5A8TX70 2615 aa13.13□□□□□ -0.31
SNRPA1-210ENST00000560383 IGHV4-30-2A0A087WSY4 118 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 TRBV4-1A0A0J9YWV2 114 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 DIRAS1O95057 198 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 FARS2O95363 451 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 SERPINA5P05154 406 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 CSF3P09919 207 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 SLC25A16P16260 332 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 GPR4P46093 362 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 PTDSS1P48651 473 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 ZNF84P51523 738 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 SMIM11AP58511 58 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 MRPS34P82930 218 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 PIGFQ07326 219 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 RAB35Q15286 201 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 SEC23BQ15437 767 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 THEM4Q5T1C6 240 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 SLC25A47Q6Q0C1 308 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 ZNF584Q8IVC4 421 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 OR4K5Q8NGD3 323 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 TSPAN32Q96QS1 320 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 MDFIQ99750 246 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 SIGLEC7Q9Y286 467 aa13.12□□□□□ -0.31
SNRPA1-210ENST00000560383 ARFGEF3Q5TH69 2177 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 IGKV1D-43A0A0B4J1Z2 117 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 SH3PXD2BA1X283 911 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 A6NIZ1 184 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 B9A039 149 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 RAB36O95755 333 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 CD14P08571 375 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 OR4A8P0C604 315 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 PATE4P0C8F1 98 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 NR4A1P22736 598 aa13.11□□□□□ -0.31
SNRPA1-210ENST00000560383 RAP1BP61224 184 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms