RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 RBMXP38159 391 aaKnown RBP10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 SLC6A9P48067 706 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 ZNF81P51508 661 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 UCP2P55851 309 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 PAX8Q06710 450 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 SLC3A1Q07837 685 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 SPRNQ5BIV9 151 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 TMEM255AQ5JRV8 349 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 FAM69AQ5T7M9 428 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 RNF220Q5VTB9 566 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 Q6ZPA2 131 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 ICA1LQ8NDH6 482 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 ADPRHL1Q8NDY3 354 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 VPS37AQ8NEZ2 397 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 OR52E2Q8NGJ4 325 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 DYDC1Q8WWB3 177 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 RSPO3Q9BXY4 272 aaPredicted RBP10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 TCF7L2Q9NQB0 619 aa10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 ZNF443Q9Y2A4 671 aaPredicted RBP10.79□□□□□ -0.68
RABGGTA-213ENST00000560127 DNAH9Q9NYC9 4486 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 IGKV1D-42A0A075B6H8 117 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 A8MXK9 166 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 UBDO15205 165 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 OR2T1O43869 369 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 MFN2O95140 757 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 TGDSO95455 350 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 MT-ND5P03915 603 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 SBK2P0C263 348 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 DRD4P21917 467 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 MMP15P51511 669 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 MVDP53602 400 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 CLNS1AP54105 237 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 TXNL4AP83876 142 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 HOXC5Q00444 222 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 GUCY1A3Q02108 690 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 MOGQ16653 247 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 GTDC1Q4AE62 458 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 FIP1L1Q6UN15 594 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 C6orf89Q6UWU4 347 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 PIWIL3Q7Z3Z3 882 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 SNX32Q86XE0 403 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 MIER2Q8N344 545 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 SLC22A24Q8N4F4 322 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 OR6N1Q8NGY5 312 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 STON2Q8WXE9 905 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 SLC41A3Q96GZ6 507 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 CCDC28BQ9BUN5 200 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 PRDM13Q9H4Q3 707 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 PATZ1Q9HBE1 687 aaKnown RBP10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 CDH20Q9HBT6 801 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 ZIM2Q9NZV7 527 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 EGFL7Q9UHF1 273 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 BTNL2Q9UIR0 455 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 NPTNQ9Y639 398 aa10.78□□□□□ -0.68
RABGGTA-213ENST00000560127 A0A087WUJ7 227 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 CCDC154A6NI56 674 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 ZSCAN5BA6NJL1 495 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 SRRM5B3KS81 715 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 SNAP29O95721 258 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 CRYBA1P05813 215 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 S100A3P33764 101 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 ANXA11P50995 505 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 PMS2P3Q13401 168 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 HLXQ14774 488 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 TAF9Q16594 264 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 DPY19L1Q2PZI1 675 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 DEFB112Q30KQ8 113 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 WDR88Q6ZMY6 472 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 NET1Q7Z628 596 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 MSRB3Q8IXL7 192 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 FAM110DQ8TAY7 271 aaPredicted RBP10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 GEMIN6Q8WXD5 167 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 SLC38A4Q969I6 547 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 VPS33AQ96AX1 596 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 DCLRE1CQ96SD1 692 aaKnown RBP10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 DIRC2Q96SL1 478 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 SH3GL3Q99963 347 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 BCL2L14Q9BZR8 327 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 CCDC134Q9H6E4 229 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 TNFRSF19Q9NS68 423 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 KLHL14Q9P2G3 628 aa10.77□□□□□ -0.69
RABGGTA-213ENST00000560127 TRAV36DV7A0A075B6V5 113 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 ZNF726A6NNF4 738 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 F5H0A9 414 aaPredicted RBP10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 POLR3GO15318 223 aaPredicted RBP10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 PIN1P1O15428 100 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 SLC22A3O75751 556 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 PPIAL4GP0DN37 164 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 NQO1P15559 274 aaKnown RBP10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 CSNK1A1P48729 337 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 PAX2Q02962 417 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 LARS2Q15031 903 aaKnown RBP10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 BEAN1Q3B7T3 259 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 C5orf46Q6UWT4 87 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 SPICQ8N5J4 248 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 OR1J1Q8NGS3 322 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 UPRTQ96BW1 309 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 OR52E6Q96RD3 313 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 SPATA9Q9BWV2 254 aa10.76□□□□□ -0.69
RABGGTA-213ENST00000560127 EGLN1Q9GZT9 426 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms