RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 CDC14BO60729 498 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 RNASEH1O60930 286 aaKnown RBP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 CLDN7O95471 211 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 NUDT3O95989 172 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 HAND1O96004 215 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 IFNW1P05000 195 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 HTR1AP08908 422 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 EPCAMP16422 314 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 ALOX5APP20292 161 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 EPHA3P29320 983 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 RGRP47804 291 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 AGTR2P50052 363 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 NOVA1P51513 510 aaKnown RBP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 NUDT6P53370 316 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 GEMP55040 296 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 STXBP1P61764 594 aaKnown RBP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 TBPL1P62380 186 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 TIAL1Q01085 375 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 EDDM3AQ14507 147 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 C16orf72Q14CZ0 275 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 PMVKQ15126 192 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 QPRTQ15274 297 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 FCN2Q15485 313 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 TEAD2Q15562 447 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 GUCA2BQ16661 112 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 HIST3H3Q16695 136 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 ATAD3CQ5T2N8 411 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 TSTD2Q5T7W7 516 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 SAMD13Q5VXD3 122 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 REP15Q6BDI9 236 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 TAPT1Q6NXT6 567 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 SIGLEC15Q6ZMC9 328 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 NUFIP2Q7Z417 695 aaKnown RBP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 KCNMB4Q86W47 210 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 RNF130Q86XS8 419 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 APOBEC3FQ8IUX4 373 aaKnown RBP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 SLC30A8Q8IWU4 369 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 TDHQ8IZJ6 230 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 LRRC25Q8N386 305 aaPredicted RBP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 CADM2Q8N3J6 435 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 ARRDC1Q8N5I2 433 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 ATPAF2Q8N5M1 289 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 PNLDC1Q8NA58 520 aaKnown RBP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 DMBX1Q8NFW5 382 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 KBTBD8Q8NFY9 601 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 OR9Q2Q8NGE9 314 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 OR13C4Q8NGS5 318 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 OR6K6Q8NGW6 343 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 OR52E5Q8NH55 327 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 RNASEH2CQ8TDP1 164 aaKnown RBP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 C2CD4CQ8TF44 421 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 NTNG2Q96CW9 530 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 ORAI1Q96D31 301 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 SMIM19Q96E16 107 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 MOCOSQ96EN8 888 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 IGSF21Q96ID5 467 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 KCTD7Q96MP8 289 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 AGAP4Q96P64 663 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 TSSK2Q96PF2 358 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 APOL4Q9BPW4 351 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 TRIM51Q9BSJ1 452 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 CCDC32Q9BV29 185 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 ELOVL1Q9BW60 279 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 TMEM39BQ9GZU3 492 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 GSTO2Q9H4Y5 243 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 Q9N2K0 584 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 CALML5Q9NZT1 146 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 GNG12Q9UBI6 72 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 METTL1Q9UBP6 276 aaKnown RBP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 STEAP1Q9UHE8 339 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 ABT1Q9ULW3 272 aaKnown RBP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 ING4Q9UNL4 249 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 SH2B3Q9UQQ2 575 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 RPL36Q9Y3U8 105 aaKnown RBP4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 PRSS21Q9Y6M0 314 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 HSPE1-MOB4S4R3N1 261 aa4.02□□□□□ -1.77
HMGB3P26-201ENST00000560051 ADGRA2Q96PE1 1338 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 SNAPC4Q5SXM2 1469 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ARHGAP35Q9NRY4 1499 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ZNF816-ZNF321PA0A0X1KG74 233 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 A0A1W2PPV9 198 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 SLC22A20A6NK97 555 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 HACD1B0YJ81 288 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ANKRD63C9JTQ0 380 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 C15orf65H3BRN8 121 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 M0R143 59 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 TNFSF11O14788 317 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 XPNPEP2O43895 674 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 EIF3GO75821 320 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 TRAPPC6AO75865 159 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 S1PR2O95136 353 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 GADD45GO95257 159 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 TTLL1O95922 423 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 CRYAAP02489 173 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 RLN2P04090 185 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 CSN3P07498 182 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 NUDT17P0C025 328 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 MUC1P15941 1255 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 HIST1H1BP16401 226 aaKnown RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 KITLGP21583 273 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms