RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 ZNF74Q16587 644 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 TMEM201Q5SNT2 666 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 ACSM5Q6NUN0 579 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 BEND4Q6ZU67 534 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 MEX3DQ86XN8 651 aaKnown RBP18.07■□□□□ 0.48
PSEN1-225ENST00000560005 LNX2Q8N448 690 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 SLC25A43Q8WUT9 341 aaPredicted RBP18.07■□□□□ 0.48
PSEN1-225ENST00000560005 MYDGFQ969H8 173 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 GMPPAQ96IJ6 420 aaPredicted RBP18.07■□□□□ 0.48
PSEN1-225ENST00000560005 BEX2Q9BXY8 128 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 PLA2G12AQ9BZM1 189 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 OR10A4Q9H209 315 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 SNX5Q9Y5X3 404 aa18.07■□□□□ 0.48
PSEN1-225ENST00000560005 IRGMA1A4Y4 181 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 NPIPB7O75200 414 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 WBP4O75554 376 aaKnown RBP18.06■□□□□ 0.48
PSEN1-225ENST00000560005 CD3EP07766 207 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 IGFBP1P08833 259 aaPredicted RBP18.06■□□□□ 0.48
PSEN1-225ENST00000560005 PSMB1P20618 241 aaKnown RBP18.06■□□□□ 0.48
PSEN1-225ENST00000560005 IL11P20809 199 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 SRSF2Q01130 221 aaKnown RBP18.06■□□□□ 0.48
PSEN1-225ENST00000560005 APOFQ13790 326 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 PLPPR5Q32ZL2 321 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 FAM69AQ5T7M9 428 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 ZNF773Q6PK81 442 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 DPY19L2P2Q6ZN68 376 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 GGNQ86UU5 652 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 TCEANCQ8N8B7 351 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 OR13C2Q8NGS9 318 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 OR51A7Q8NH64 312 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 TMEM163Q8TC26 289 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 S100PBPQ96BU1 408 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 TNFRSF13CQ96RJ3 184 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 KCNK17Q96T54 332 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 IFT27Q9BW83 186 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 DUSP21Q9H596 190 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 NDUFA13Q9P0J0 144 aa18.06■□□□□ 0.48
PSEN1-225ENST00000560005 RPL36Q9Y3U8 105 aaKnown RBP18.06■□□□□ 0.48
PSEN1-225ENST00000560005 IGHV4-30-2A0A087WSY4 118 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 TMEM72A0PK05 275 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 EFCAB10A6NFE3 127 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 TRIM64CA6NLI5 447 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 SHISA8B8ZZ34 492 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 EIF1AYO14602 144 aaKnown RBP18.05■□□□□ 0.48
PSEN1-225ENST00000560005 IFNGP01579 166 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 FMO3P31513 532 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 EFNB1P98172 346 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 EGR4Q05215 589 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 TMEM249Q2WGJ8 235 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 ZNF672Q499Z4 452 aaPredicted RBP18.05■□□□□ 0.48
PSEN1-225ENST00000560005 NCMAPQ5T1S8 102 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 C1orf140Q5VVS0 124 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 SLC46A3Q7Z3Q1 461 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 ZNF540Q8NDQ6 660 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 OR8D4Q8NGM9 314 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 APH1BQ8WW43 257 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 RFKQ969G6 155 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 UBE2FQ969M7 185 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 RHNO1Q9BSD3 238 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 FN3KQ9H479 309 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 BARX1Q9HBU1 254 aaPredicted RBP18.05■□□□□ 0.48
PSEN1-225ENST00000560005 H2AFY2Q9P0M6 372 aaPredicted RBP18.05■□□□□ 0.48
PSEN1-225ENST00000560005 VDAC3Q9Y277 283 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 HIF3AQ9Y2N7 669 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 CORINQ9Y5Q5 1042 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 ALPK2Q86TB3 2170 aa18.05■□□□□ 0.48
PSEN1-225ENST00000560005 CADP27708 2225 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 BHLHE40O14503 412 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 SSX4O60224 188 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 ASAH2BP0C7U1 165 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 SMIM18P0DKX4 95 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 APEHP13798 732 aaKnown RBP18.04■□□□□ 0.48
PSEN1-225ENST00000560005 CCNA2P20248 432 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 PTNP21246 168 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 CLEC12AQ5QGZ9 265 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 LAIR2Q6ISS4 152 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 GTPBP8Q8N3Z3 284 aaPredicted RBP18.04■□□□□ 0.48
PSEN1-225ENST00000560005 IQCF1Q8N6M8 205 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 STEAP2Q8NFT2 490 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 KBTBD8Q8NFY9 601 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 MFSD8Q8NHS3 518 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 KTI12Q96EK9 354 aaPredicted RBP18.04■□□□□ 0.48
PSEN1-225ENST00000560005 IL4I1Q96RQ9 567 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 GPX7Q96SL4 187 aaPredicted RBP18.04■□□□□ 0.48
PSEN1-225ENST00000560005 ASPNQ9BXN1 380 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 ESRP2Q9H6T0 727 aaKnown RBP18.04■□□□□ 0.48
PSEN1-225ENST00000560005 C12orf49Q9H741 205 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 CNOT2Q9NZN8 540 aaKnown RBP18.04■□□□□ 0.48
PSEN1-225ENST00000560005 KLHL21Q9UJP4 597 aa18.04■□□□□ 0.48
PSEN1-225ENST00000560005 TRAV27A0A087WT01 109 aa18.03■□□□□ 0.48
PSEN1-225ENST00000560005 A0A096LNT2 108 aa18.03■□□□□ 0.48
PSEN1-225ENST00000560005 RIIAD1A6NNX1 92 aa18.03■□□□□ 0.48
PSEN1-225ENST00000560005 PTGES3LE9PB15 166 aa18.03■□□□□ 0.48
PSEN1-225ENST00000560005 IMPA2O14732 288 aa18.03■□□□□ 0.48
PSEN1-225ENST00000560005 ARPC3O15145 178 aa18.03■□□□□ 0.48
PSEN1-225ENST00000560005 SURF4O15260 269 aa18.03■□□□□ 0.48
PSEN1-225ENST00000560005 RGS10O43665 173 aa18.03■□□□□ 0.48
PSEN1-225ENST00000560005 BGLAPP02818 100 aa18.03■□□□□ 0.48
PSEN1-225ENST00000560005 ATP6V1B1P15313 513 aa18.03■□□□□ 0.48
PSEN1-225ENST00000560005 ZNF17P17021 662 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms