RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 KHDRBS3O75525 346 aaKnown RBP8.85□□□□□ -0.99
USP3-216ENST00000559873 TP53P04637 393 aaPredicted RBP8.85□□□□□ -0.99
USP3-216ENST00000559873 ALPLP05186 524 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 B4GALT1P15291 398 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 HIST1H1CP16403 213 aaKnown RBP8.85□□□□□ -0.99
USP3-216ENST00000559873 CAPZA2P47755 286 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 CENPAP49450 140 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 ZNF133P52736 654 aaPredicted RBP8.85□□□□□ -0.99
USP3-216ENST00000559873 LCN6P62502 163 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 ARF1P84077 181 aaKnown RBP8.85□□□□□ -0.99
USP3-216ENST00000559873 RUNX1T1Q06455 604 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 FMODQ06828 376 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 LGALS3BPQ08380 585 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 GINS1Q14691 196 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 PPA1Q15181 289 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 GABRA6Q16445 453 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 TBRG1Q3YBR2 411 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 SLC36A2Q495M3 483 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 ZNF627Q7L945 461 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 PACRGLQ8N7B6 248 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 SDR9C7Q8NEX9 313 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 OR52E2Q8NGJ4 325 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 OR2T4Q8NH00 348 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 OR4K13Q8NH42 304 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 BOD1Q96IK1 185 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 RDH12Q96NR8 316 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 MUS81Q96NY9 551 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 NMNAT3Q96T66 252 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 GABARAPL3Q9BY60 117 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 RACGAP1Q9H0H5 632 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 RIBC2Q9H4K1 309 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 CMC2Q9NRP2 79 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 TMEM38BQ9NVV0 291 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 FBXL3Q9UKT7 428 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 BAHCC1Q9P281 2608 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 HECTD1Q9ULT8 2610 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 COL12A1Q99715 3063 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 ALPK2Q86TB3 2170 aa8.85□□□□□ -0.99
USP3-216ENST00000559873 ARPC4-TTLL3A0A0A6YYG9 625 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 A0A1W2PPL8 197 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 SLC16A7O60669 478 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 UBL3O95164 117 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 SLC2A10O95528 541 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 IGFBP1P08833 259 aaPredicted RBP8.84□□□□□ -0.99
USP3-216ENST00000559873 OR8G3PP0DMU2 310 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 EPXP11678 715 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 MSR1P21757 451 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 GIPRP48546 466 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 BLVRAP53004 296 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 NR1H2P55055 460 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 MRPS34P82930 218 aaKnown RBP8.84□□□□□ -0.99
USP3-216ENST00000559873 GLO1Q04760 184 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 SLC34A1Q06495 639 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 TSC22D1Q15714 1073 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 TAB1Q15750 504 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 HIKESHIQ53FT3 197 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 PHYHD1Q5SRE7 291 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 SLC35F1Q5T1Q4 408 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 ANKRD34AQ69YU3 496 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 SP5Q6BEB4 398 aaPredicted RBP8.84□□□□□ -0.99
USP3-216ENST00000559873 LRFN4Q6PJG9 635 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 LINGO2Q7L985 606 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 WFDC8Q8IUA0 241 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 GLB1L2Q8IW92 636 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 IQCF1Q8N6M8 205 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 ACBD4Q8NC06 268 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 OR4Q3Q8NH05 313 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 NSMAFQ92636 917 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 NMD3Q96D46 503 aaKnown RBP8.84□□□□□ -0.99
USP3-216ENST00000559873 ZC3HAV1LQ96H79 300 aaKnown RBP8.84□□□□□ -0.99
USP3-216ENST00000559873 VCX3BQ9H321 246 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 NELFAQ9H3P2 528 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 RERGLQ9H628 205 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 SEC61A2Q9H9S3 476 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 SIAEQ9HAT2 523 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 RNPEPL1Q9HAU8 725 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 RPRD1BQ9NQG5 326 aaKnown RBP8.84□□□□□ -0.99
USP3-216ENST00000559873 SLC17A5Q9NRA2 495 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 CRIM1Q9NZV1 1036 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 FKBP7Q9Y680 259 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 PKDREJQ9NTG1 2253 aa8.84□□□□□ -0.99
USP3-216ENST00000559873 HCFC1P51610 2035 aa8.83□□□□□ -1
USP3-216ENST00000559873 A0A096LPE4 126 aa8.83□□□□□ -1
USP3-216ENST00000559873 A0A1W2PPZ6 126 aa8.83□□□□□ -1
USP3-216ENST00000559873 MITFO75030 526 aaPredicted RBP8.83□□□□□ -1
USP3-216ENST00000559873 SEC14L2O76054 403 aa8.83□□□□□ -1
USP3-216ENST00000559873 RAB36O95755 333 aa8.83□□□□□ -1
USP3-216ENST00000559873 CTLA4P16410 223 aa8.83□□□□□ -1
USP3-216ENST00000559873 CRYGSP22914 178 aa8.83□□□□□ -1
USP3-216ENST00000559873 PEX2P28328 305 aa8.83□□□□□ -1
USP3-216ENST00000559873 ARR3P36575 388 aa8.83□□□□□ -1
USP3-216ENST00000559873 CDKN2AP42771 156 aaKnown RBP8.83□□□□□ -1
USP3-216ENST00000559873 FOXG1P55316 489 aaPredicted RBP8.83□□□□□ -1
USP3-216ENST00000559873 CDC42P60953 191 aa8.83□□□□□ -1
USP3-216ENST00000559873 PCBD1P61457 104 aa8.83□□□□□ -1
USP3-216ENST00000559873 NPRL3Q12980 569 aa8.83□□□□□ -1
USP3-216ENST00000559873 CRMP1Q14194 572 aa8.83□□□□□ -1
USP3-216ENST00000559873 PTGES3Q15185 160 aaKnown RBP8.83□□□□□ -1
USP3-216ENST00000559873 SNAPC1Q16533 368 aa8.83□□□□□ -1
USP3-216ENST00000559873 GSG1Q2KHT4 349 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms