RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	OR8G3P	P0DMU2	310 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	CD47	Q08722	323 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	KPNB1	Q14974	876 aa	Known RBP	11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	NRN1L	Q496H8	165 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	C10orf128	Q5T292	105 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	SMARCD3	Q6STE5	483 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	SLC22A24	Q8N4F4	322 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	ZNF519	Q8TB69	540 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	GNPDA2	Q8TDQ7	276 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	NANOS1	Q8WY41	292 aa	Known RBP	11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	GPX7	Q96SL4	187 aa	Predicted RBP	11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	FOXC2	Q99958	501 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	REEP1	Q9H902	201 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	TMEM38B	Q9NVV0	291 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	B3GNT2	Q9NY97	397 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	ADAM18	Q9Y3Q7	739 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	IGHV1-18	A0A0C4DH31	117 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	FARS2	O95363	451 aa	Known RBP	11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	CST1	P01037	141 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	HLA-H	P01893	362 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	GSS	P48637	474 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	ART1	P52961	327 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	TSPAN31	Q12999	210 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	GSG1	Q2KHT4	349 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	DEFB113	Q30KQ7	82 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	USF3	Q68DE3	2245 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	GPR139	Q6DWJ6	353 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	DPY19L2P2	Q6ZN68	376 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	FAM122B	Q7Z309	247 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	OR4C15	Q8NGM1	316 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	NEUROG1	Q92886	237 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	NMD3	Q96D46	503 aa	Known RBP	11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	CCL19	Q99731	98 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	AKAP9	Q99996	3911 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	CELSR1	Q9NYQ6	3014 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	POU2F3	Q9UKI9	436 aa		11.91	□□□□□ -0.5
CHRNB4-204	ENST00000559849	TCRBV3S1	A0A5B6	114 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	ZNF503-AS2	A6NEH8	195 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	XKRY	O14609	159 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	ARHGEF9	O43307	516 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	CCNB2	O95067	398 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	IGLV1-44	P01699	117 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	CRYAA	P02489	173 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	CD79A	P11912	226 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	FXYD6P3	P58550	94 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	RAB1A	P62820	205 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	PPP1R8	Q12972	351 aa	Known RBP	11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	GK3P	Q14409	553 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	MICA	Q29983	383 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	RFX4	Q33E94	735 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	PGBD2	Q6P3X8	592 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	THSD4	Q6ZMP0	1018 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	SKA3	Q8IX90	412 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	SMAP2	Q8WU79	429 aa	Predicted RBP	11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849		Q96M85	177 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	ZNF570	Q96NI8	536 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	BEX4	Q9NWD9	120 aa	Predicted RBP	11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	IL20RA	Q9UHF4	553 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	SAMHD1	Q9Y3Z3	626 aa	Known RBP	11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849		U3KQV3	271 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	VPS13C	Q709C8	3753 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	RTTN	Q86VV8	2226 aa		11.9	□□□□□ -0.5
CHRNB4-204	ENST00000559849	UBL3	O95164	117 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	SLC2A10	O95528	541 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	SDHA	P31040	664 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	GUCA1A	P43080	201 aa	Predicted RBP	11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	CDH11	P55287	796 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	PIGF	Q07326	219 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	SPOCK1	Q08629	439 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	C1orf146	Q5VVC0	180 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	MDP1	Q86V88	176 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	IL17RD	Q8NFM7	739 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	KCNS3	Q9BQ31	491 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	OR52D1	Q9H346	318 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	SIAE	Q9HAT2	523 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	FAIM	Q9NVQ4	179 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	CHCHD3	Q9NX63	227 aa	Known RBP	11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	ZNF224	Q9NZL3	707 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	MOK	Q9UQ07	419 aa		11.9	□□□□□ -0.51
CHRNB4-204	ENST00000559849	GNGT2	O14610	69 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	TMCC2	O75069	709 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	GAST	P01350	101 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	CECR9	P0C854	216 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	DANCR	P0C864	163 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	APEH	P13798	732 aa	Known RBP	11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	NPR2	P20594	1047 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	MRPS34	P82930	218 aa	Known RBP	11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	FMOD	Q06828	376 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	NPRL3	Q12980	569 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	SLC25A47	Q6Q0C1	308 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	DPPA2	Q7Z7J5	298 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	CLDN22	Q8N7P3	220 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	OR9Q2	Q8NGE9	314 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	FANK1	Q8TC84	345 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	TMEM171	Q8WVE6	324 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	CXXC4	Q9H2H0	198 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	VNN3	Q9NY84	501 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	LAMP3	Q9UQV4	416 aa		11.89	□□□□□ -0.51
CHRNB4-204	ENST00000559849	IER3IP1	Q9Y5U9	82 aa		11.89	□□□□□ -0.51

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