RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 SOX8P57073 446 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 EGR3Q06889 387 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 PUDPQ08623 228 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 H3F3CQ6NXT2 135 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 TMEM81Q6P7N7 255 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 H1FNTQ75WM6 255 aaPredicted RBP15.96■□□□□ 0.15
SNX1-208ENST00000559844 RPS19BP1Q86WX3 136 aaKnown RBP15.96■□□□□ 0.15
SNX1-208ENST00000559844 DND1Q8IYX4 353 aaKnown RBP15.96■□□□□ 0.15
SNX1-208ENST00000559844 OR6N2Q8NGY6 317 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 CDCP1Q9H5V8 836 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 C14orf119Q9NWQ9 140 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 B9D1Q9UPM9 204 aa15.96■□□□□ 0.15
SNX1-208ENST00000559844 MPDZO75970 2070 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 B4DXG7 233 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 ITGA10O75578 1167 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 KRT8P05787 483 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 DAP3P51398 398 aaKnown RBP15.95■□□□□ 0.14
SNX1-208ENST00000559844 OR7A5Q15622 319 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 PLPPR5Q32ZL2 321 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 IDNKQ5T6J7 187 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 FAM205BPQ63HN1 556 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 OR2M3Q8NG83 312 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 CNTNAP3BQ96NU0 1288 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 MFRPQ9BY79 579 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 CNTNAP3Q9BZ76 1288 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 PPIL3Q9H2H8 161 aaKnown RBP15.95■□□□□ 0.14
SNX1-208ENST00000559844 TVP23AA6NH52 213 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 NPIPB13A6NJU9 1138 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 NPIPB4C9JG80 1138 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 HPGDSO60760 199 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 UCHL1P09936 223 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 TFPIP10646 304 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 CRABP1P29762 137 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 PSMB10P40306 273 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 YIF1BQ5BJH7 314 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 SFXN4Q6P4A7 337 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 PTGES2Q9H7Z7 377 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 CHST11Q9NPF2 352 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 ALKBH4Q9NXW9 302 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 TEKT2Q9UIF3 430 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 ZNF281Q9Y2X9 895 aa15.95■□□□□ 0.14
SNX1-208ENST00000559844 CACNA1GO43497 2377 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 ZNF879B4DU55 563 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 FZD7O75084 574 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 IL7P13232 177 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 RAB3BP20337 219 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 AZGP1P25311 298 aaKnown RBP15.94■□□□□ 0.14
SNX1-208ENST00000559844 EVX1P49640 407 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 MLF1P58340 268 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 SCN1BQ07699 218 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 PYDC2Q56P42 97 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 ACER2Q5QJU3 275 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 FAM27D1Q5T7N8 215 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 CNIH2Q6PI25 160 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 UNQ9370/PRO34162Q6UXP9 181 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 YIPF7Q8N8F6 280 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 FDCSPQ8NFU4 85 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 OR4K17Q8NGC6 315 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 HTRA1Q92743 480 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 ARL5BQ96KC2 179 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 AGAP4Q96P64 663 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 NPAS1Q99742 590 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 TIGARQ9NQ88 270 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 KLHDC2Q9Y2U9 406 aa15.94■□□□□ 0.14
SNX1-208ENST00000559844 DSPP15924 2871 aaKnown RBP15.94■□□□□ 0.14
SNX1-208ENST00000559844 TNRC6AQ8NDV7 1962 aaKnown RBP15.94■□□□□ 0.14
SNX1-208ENST00000559844 SLC22A23A1A5C7 686 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 CENPBD1B2RD01 187 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 NPIPA5E9PKD4 350 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 MS4A18H0YCH9 400 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 AKR7A3O95154 331 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 ALOX5APP20292 161 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 FKBP2P26885 142 aaKnown RBP15.93■□□□□ 0.14
SNX1-208ENST00000559844 RPS11P62280 158 aaKnown RBP eCLIP15.93■□□□□ 0.14
SNX1-208ENST00000559844 MS4A18Q3C1V0 323 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 NR2C2APQ86WQ0 139 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 ARMC10Q8N2F6 343 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 FADS6Q8N9I5 356 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 OR13C5Q8NGS8 318 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 ASB17Q8WXJ9 295 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 FRMD6Q96NE9 622 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 SOSTQ9BQB4 213 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 FANCFQ9NPI8 374 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 MRM2Q9UI43 246 aaKnown RBP15.93■□□□□ 0.14
SNX1-208ENST00000559844 NPIPA1Q9UND3 350 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 B3GALT5Q9Y2C3 310 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 CHCHD2Q9Y6H1 151 aaPredicted RBP15.93■□□□□ 0.14
SNX1-208ENST00000559844 LIPT2A6NK58 231 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 PRR32B1ATL7 298 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 SLC16A7O60669 478 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 HLA-DQA2P01906 255 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 OR8G3PP0DMU2 310 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 EIF1P41567 113 aaKnown RBP15.93■□□□□ 0.14
SNX1-208ENST00000559844 RIN1Q13671 783 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 ALKBH1Q13686 389 aaKnown RBP15.93■□□□□ 0.14
SNX1-208ENST00000559844 BAK1Q16611 211 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 TBR1Q16650 682 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 HSD17B12Q53GQ0 312 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 ABHD17BQ5VST6 288 aa15.93■□□□□ 0.14
SNX1-208ENST00000559844 LIPNQ5VXI9 398 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms