RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ZNRF4Q8WWF5 429 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 LURAP1Q96LR2 239 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 ZNF570Q96NI8 536 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 PKP2Q99959 881 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 GABARAPL1Q9H0R8 117 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 CLEC4MQ9H2X3 399 aaPredicted RBP9.97□□□□□ -0.81
SNX1-204ENST00000559061 VSX1Q9NZR4 365 aaPredicted RBP9.97□□□□□ -0.81
SNX1-204ENST00000559061 MGAT4BQ9UQ53 548 aa9.97□□□□□ -0.81
SNX1-204ENST00000559061 ROS1P08922 2347 aa9.96□□□□□ -0.81
SNX1-204ENST00000559061 AKAP6Q13023 2319 aa9.96□□□□□ -0.81
SNX1-204ENST00000559061 IGLV1-36A0A0B4J1U3 117 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 IGHV1-18A0A0C4DH31 117 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 PRSS37A4D1T9 235 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 SHISA9B4DS77 424 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 ARHGEF9O43307 516 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 MITFO75030 526 aaPredicted RBP9.96□□□□□ -0.82
SNX1-204ENST00000559061 GPANK1O95872 356 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 IGKV3-15P01624 115 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 HLA-HP01893 362 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 PSKH1P11801 424 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 SLC6A6P31641 620 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 IFNGR2P38484 337 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 ZNF83P51522 516 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 ZSCAN26Q16670 478 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 BEX5Q5H9J7 111 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 LCE2DQ5TA82 110 aaPredicted RBP9.96□□□□□ -0.82
SNX1-204ENST00000559061 FAM205BPQ63HN1 556 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 ZNF813Q6ZN06 617 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 MDP1Q86V88 176 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 ZNF584Q8IVC4 421 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 IQCF1Q8N6M8 205 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 NPEPL1Q8NDH3 523 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 KBTBD8Q8NFY9 601 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 IGFBPL1Q8WX77 278 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 NSMAFQ92636 917 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 FOXN4Q96NZ1 517 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 TSSK2Q96PF2 358 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 ERMAPQ96PL5 475 aaPredicted RBP9.96□□□□□ -0.82
SNX1-204ENST00000559061 SH3GL3Q99963 347 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 SYT4Q9H2B2 425 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 SEMA6AQ9H2E6 1030 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 FN3KQ9H479 309 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 SMURF2Q9HAU4 748 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 SLC24A3Q9HC58 644 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 KRCC1Q9NPI7 259 aaPredicted RBP9.96□□□□□ -0.82
SNX1-204ENST00000559061 ZNF226Q9NYT6 803 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 TMEFF2Q9UIK5 374 aaPredicted RBP9.96□□□□□ -0.82
SNX1-204ENST00000559061 AMDHD2Q9Y303 409 aa9.96□□□□□ -0.82
SNX1-204ENST00000559061 OR6C68A6NDL8 312 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 A6NIZ1 184 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 MGRN1O60291 552 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 DEAF1O75398 565 aaPredicted RBP9.95□□□□□ -0.82
SNX1-204ENST00000559061 GOSR1O95249 250 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 MMP7P09237 267 aaPredicted RBP9.95□□□□□ -0.82
SNX1-204ENST00000559061 CECR9P0C854 216 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 GAAP10253 952 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 CD40P25942 277 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 EPHA2P29317 976 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 CALCRP30988 508 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 RAP1BP61224 184 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 RAP1AP62834 184 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 TGFBR3Q03167 851 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 CD47Q08722 323 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 ENDOGQ14249 297 aaKnown RBP9.95□□□□□ -0.82
SNX1-204ENST00000559061 SLC36A3Q495N2 470 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 SLC35F1Q5T1Q4 408 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 GPR139Q6DWJ6 353 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 UGT2A3Q6UWM9 527 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 TMEM200AQ86VY9 491 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 LNX2Q8N448 690 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 SLC22A24Q8N4F4 322 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 SDR9C7Q8NEX9 313 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 OR4K13Q8NH42 304 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 OR5K1Q8NHB7 308 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 FBXO17Q96EF6 278 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 NRBF2Q96F24 287 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 NMNAT3Q96T66 252 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 USB1Q9BQ65 265 aaKnown RBP9.95□□□□□ -0.82
SNX1-204ENST00000559061 IFT27Q9BW83 186 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 YY1AP1Q9H869 796 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 B3GAT2Q9NPZ5 323 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 GRHPRQ9UBQ7 328 aa9.95□□□□□ -0.82
SNX1-204ENST00000559061 PLCE1Q9P212 2302 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 E9PQ18 207 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 GNGT2O14610 69 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 E2F6O75461 281 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 MPZL1O95297 269 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 ZNF14P17017 642 aaPredicted RBP9.94□□□□□ -0.82
SNX1-204ENST00000559061 FASP25445 335 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 NOS3P29474 1203 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 RPS6KA3P51812 740 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 MRPS34P82930 218 aaKnown RBP9.94□□□□□ -0.82
SNX1-204ENST00000559061 PPP2R2BQ00005 443 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.94□□□□□ -0.82
SNX1-204ENST00000559061 PGGHGQ32M88 737 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 THEM4Q5T1C6 240 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 KDM4DQ6B0I6 523 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 ACSM5Q6NUN0 579 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 ADAM5Q6NVV9 412 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 ZNF704Q6ZNC4 412 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms