RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 NKX2-6A6NCS4 301 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 OR6C68A6NDL8 312 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 FAM183AA6NL82 134 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 A8MXE2 369 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF99A8MXY4 864 aaPredicted RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 H0YAE9 185 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 RPL36A-HNRNPH2H7BZ11 118 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 TLX2O43763 284 aaPredicted RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 PRKYO43930 277 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 MPZL2O60487 215 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 RAD51DO75771 328 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 LYZL6O75951 148 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 SEC14L2O76054 403 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 FARS2O95363 451 aaKnown RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 HLA-DQA2P01906 255 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 CTLA4P16410 223 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 SPI1P17947 270 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 COX5AP20674 150 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 CD79BP40259 229 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC25A1P53007 311 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 ADARB1P78563 741 aaKnown RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 ARF1P84077 181 aaKnown RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 IL5RAQ01344 420 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 GLO1Q04760 184 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 IL18R1Q13478 541 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 STK11Q15831 433 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 HIST3H3Q16695 136 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 KLHL12Q53G59 568 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 PHYHD1Q5SRE7 291 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 C10orf128Q5T292 105 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 C6orf52Q5T4I8 152 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 LCN1P1Q5VSP4 162 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 PLBD1Q6P4A8 553 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 LRFN4Q6PJG9 635 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC25A47Q6Q0C1 308 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF474Q6S9Z5 364 aaPredicted RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 KLHL24Q6TFL4 600 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF813Q6ZN06 617 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 LINGO2Q7L985 606 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 BHLHA15Q7RTS1 189 aaPredicted RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 CXorf67Q86X51 503 aaPredicted RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 CPOQ8IVL8 374 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 GID4Q8IVV7 300 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 C8orf59Q8N0T1 100 aaPredicted RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 GABRG1Q8N1C3 465 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 FAM26EQ8N5C1 309 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 NPEPL1Q8NDH3 523 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 OR10H5Q8NGA6 315 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 OR6K6Q8NGW6 343 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 TMEM163Q8TC26 289 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 SSC4DQ8WTU2 575 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 TRUB1Q8WWH5 349 aaKnown RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 ITLN2Q8WWU7 325 aaPredicted RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 RNASE6Q93091 150 aaKnown RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 KISS1RQ969F8 398 aaPredicted RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 NMD3Q96D46 503 aaKnown RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 TSSK2Q96PF2 358 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF184Q99676 751 aaPredicted RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 FOXB1Q99853 325 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 NUAK2Q9H093 628 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 RACGAP1Q9H0H5 632 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 OR51V1Q9H2C8 321 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 Q9H521 79 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 MED20Q9H944 212 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 SEC61A2Q9H9S3 476 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 SRA1Q9HD15 236 aaKnown RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 HINT3Q9NQE9 182 aaKnown RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 GALNT8Q9NY28 637 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 ELOVL5Q9NYP7 299 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 JKAMPQ9P055 326 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 B9D1Q9UPM9 204 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 COA3Q9Y2R0 106 aaPredicted RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 POLR1DQ9Y2S0 133 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 PCNX1Q96RV3 2341 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 PHF3Q92576 2039 aaKnown RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 MYO7BQ6PIF6 2116 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 MED12LQ86YW9 2145 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 FASNP49327 2511 aaKnown RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 IGLV1-36A0A0B4J1U3 117 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 IGKV1D-43A0A0B4J1Z2 117 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC22A31A6NKX4 558 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 SNTNA6NMZ2 147 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 FAM171A2A8MVW0 826 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 C16orf97H3BN30 126 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 DCTN6O00399 190 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 PRODHO43272 600 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 GLCEO94923 617 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 CLIC3O95833 236 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 GYPBP06028 91 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 ITGA5P08648 1049 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 B4GALT1P15291 398 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 NPR2P20594 1047 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 PSMB1P20618 241 aaKnown RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 IGHV1-2P23083 117 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 LAP3P28838 519 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 FMO3P31513 532 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 CDAP32320 146 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 PYCR1P32322 319 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 CAPZA2P47755 286 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF133P52736 654 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms