RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 HOXB9P17482 250 aaPredicted RBP6.34□□□□□ -1.39
SPG11-213ENST00000558988 CDH12P55289 794 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 SH3BGRP55822 239 aaPredicted RBP6.34□□□□□ -1.39
SPG11-213ENST00000558988 SRSF2Q01130 221 aaKnown RBP6.34□□□□□ -1.39
SPG11-213ENST00000558988 SNTB2Q13425 540 aaKnown RBP6.34□□□□□ -1.39
SPG11-213ENST00000558988 CAMK2DQ13557 499 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 SELPLGQ14242 412 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 ADIPOQQ15848 244 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 MST1LQ2TV78 715 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 PHYHD1Q5SRE7 291 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 LRIF1Q5T3J3 769 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 CYB5R2Q6BCY4 276 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 ULK3Q6PHR2 472 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 DHRS4L2Q6PKH6 230 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 ZNF813Q6ZN06 617 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 DNM1P46Q6ZS02 220 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 ZCCHC24Q8N2G6 241 aaKnown RBP6.34□□□□□ -1.39
SPG11-213ENST00000558988 ARIH2OSQ8N7S6 290 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 HIPK4Q8NE63 616 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 PIK3C3Q8NEB9 887 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 OR10H5Q8NGA6 315 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 SLC26A7Q8TE54 656 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 SCARB1Q8WTV0 552 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 DNAJA4Q8WW22 397 aaPredicted RBP6.34□□□□□ -1.39
SPG11-213ENST00000558988 SLC47A1Q96FL8 570 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 FOXN4Q96NZ1 517 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 EPYCQ99645 322 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 WFDC6Q9BQY6 131 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 CPPED1Q9BRF8 314 aaPredicted RBP6.34□□□□□ -1.39
SPG11-213ENST00000558988 CCDC28BQ9BUN5 200 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 KATNB1Q9BVA0 655 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 BEX2Q9BXY8 128 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 ULBP2Q9BZM5 246 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 SHARPINQ9H0F6 387 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 TPK1Q9H3S4 243 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 OBP2BQ9NPH6 170 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 INTS9Q9NV88 658 aaKnown RBP6.34□□□□□ -1.39
SPG11-213ENST00000558988 B3GAT1Q9P2W7 334 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 TESQ9UGI8 421 aaKnown RBP6.34□□□□□ -1.39
SPG11-213ENST00000558988 LEF1Q9UJU2 399 aaPredicted RBP6.34□□□□□ -1.39
SPG11-213ENST00000558988 CORO2BQ9UQ03 480 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 RCE1Q9Y256 329 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 POFUT2Q9Y2G5 429 aa6.34□□□□□ -1.39
SPG11-213ENST00000558988 NIPBLQ6KC79 2804 aaeCLIP6.34□□□□□ -1.4
SPG11-213ENST00000558988 A0A087WUJ7 227 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 A0A096LNT2 108 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 ARPC4-TTLL3A0A0A6YYG9 625 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 A0A0G2JND7 137 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 LRP5LA4QPB2 252 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 ZNF726A6NNF4 738 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 M0QX08 132 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 TRAF3IP2O43734 574 aaPredicted RBP6.33□□□□□ -1.4
SPG11-213ENST00000558988 ZNF432O94892 652 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 OR6A2O95222 327 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 TGDSO95455 350 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 CH25HO95992 272 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 BGLAPP02818 100 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 ERCC1P07992 297 aaPredicted RBP6.33□□□□□ -1.4
SPG11-213ENST00000558988 ADORA3P0DMS8 318 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 CBR1P16152 277 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 TCN1P20061 433 aaPredicted RBP6.33□□□□□ -1.4
SPG11-213ENST00000558988 NPR2P20594 1047 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 THBS4P35443 961 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 PTDSS1P48651 473 aaKnown RBP6.33□□□□□ -1.4
SPG11-213ENST00000558988 BIDP55957 195 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 VLDLRP98155 873 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 HGFACQ04756 655 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 LOXL1Q08397 574 aaPredicted RBP6.33□□□□□ -1.4
SPG11-213ENST00000558988 PUDPQ08623 228 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 DAG1Q14118 895 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 MELKQ14680 651 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 PODNL1Q6PEZ8 512 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 C6orf89Q6UWU4 347 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 HIPK1Q86Z02 1210 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 CDK20Q8IZL9 346 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 TMEM123Q8N131 208 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 C11orf65Q8NCR3 313 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 LINC00470Q9BZP3 86 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 OR51B6Q9H340 312 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 TOR3AQ9H497 397 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 PLK3Q9H4B4 646 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 NARFLQ9H6Q4 476 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 NOX3Q9HBY0 568 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 B3GAT2Q9NPZ5 323 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 RNF7Q9UBF6 113 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 SLC7A7Q9UM01 511 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 FZR1Q9UM11 496 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 NDUFAF1Q9Y375 327 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 NOX1Q9Y5S8 564 aa6.33□□□□□ -1.4
SPG11-213ENST00000558988 TRBV5-3A0A0A0MS03 114 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 IGHV2OR16-5A0A0B4J2B6 119 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 A0A0B4J2E0 115 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 IGHV4-61A0A0C4DH41 118 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 A0A1B0GX12 115 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 VSTM5A8MXK1 200 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 ZNF99A8MXY4 864 aaPredicted RBP6.32□□□□□ -1.4
SPG11-213ENST00000558988 B9A039 149 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 LYNX1G3V0Z9 82 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 MS4A18H0YCH9 400 aa6.32□□□□□ -1.4
SPG11-213ENST00000558988 PHF1O43189 567 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms