RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 UGT2A1Q9Y4X1 527 aa14.64□□□□□ -0.07
LRRC28-210ENST00000558879 ATRQ13535 2644 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 IGKV1D-43A0A0B4J1Z2 117 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 IGHV4-61A0A0C4DH41 118 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 M0R233 179 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 ATP8B1O43520 1251 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 SYNGR3O43761 229 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 MGRN1O60291 552 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 SLC2A10O95528 541 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 STAMBPO95630 424 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 SNAP29O95721 258 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 IFI30P13284 250 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 MAKP20794 623 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 MRPS34P82930 218 aaKnown RBP14.63□□□□□ -0.07
LRRC28-210ENST00000558879 GALK2Q01415 458 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 GGTLC2Q14390 218 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 TAF11Q15544 211 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 IFI44LQ53G44 452 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 ALG10Q5BKT4 473 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 SYT14Q8NB59 555 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 FOXN4Q96NZ1 517 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 C1orf198Q9H425 327 aa14.63□□□□□ -0.07
LRRC28-210ENST00000558879 MYEF2Q9P2K5 600 aaKnown RBP14.63□□□□□ -0.07
LRRC28-210ENST00000558879 ERCC1P07992 297 aaPredicted RBP14.62□□□□□ -0.07
LRRC28-210ENST00000558879 DAOP14920 347 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 ZNF23P17027 643 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 IFNA8P32881 189 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 YAP1P46937 504 aaKnown RBP14.62□□□□□ -0.07
LRRC28-210ENST00000558879 GZMKP49863 264 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 NUDT2P50583 147 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 PRKCDQ05655 676 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 FMODQ06828 376 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 LAPTM4AQ15012 233 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 TRAM2Q15035 370 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 SLC36A2Q495M3 483 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 CYB5R2Q6BCY4 276 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 TMEM53Q6P2H8 277 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 SLC16A14Q7RTX9 510 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 TSEN54Q7Z6J9 526 aaKnown RBP14.62□□□□□ -0.07
LRRC28-210ENST00000558879 NRMQ8IXM6 262 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 ZNF786Q8N393 782 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 PAQR4Q8N4S7 273 aaPredicted RBP14.62□□□□□ -0.07
LRRC28-210ENST00000558879 FAM156AQ8NDB6 213 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 SLC30A7Q8NEW0 376 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 ZNF519Q8TB69 540 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 ACOT11Q8WXI4 607 aaPredicted RBP14.62□□□□□ -0.07
LRRC28-210ENST00000558879 HSH2DQ96JZ2 352 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 MDFIQ99750 246 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 TPK1Q9H3S4 243 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 EFCAB1Q9HAE3 211 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 RHCGQ9UBD6 479 aa14.62□□□□□ -0.07
LRRC28-210ENST00000558879 A0A087WUU8 490 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 SH3PXD2BA1X283 911 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 NDUFAB1O14561 156 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 ZNF682O95780 498 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 SERPINA1P01009 418 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 ADRA2AP08913 450 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 TACSTD2P09758 323 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 NR2C1P13056 603 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 RPL27P61353 136 aaKnown RBP14.61□□□□□ -0.07
LRRC28-210ENST00000558879 RIN1Q13671 783 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 CHRFAM7AQ494W8 412 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 ANKDD1AQ495B1 522 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 SLC25A47Q6Q0C1 308 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 FOXL2NBQ6ZUU3 175 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 LRP11Q86VZ4 500 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 ZNF540Q8NDQ6 660 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 SYT3Q9BQG1 590 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 ALG12Q9BV10 488 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 FNDC11Q9BVV2 318 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 ANKRD19PQ9H560 264 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 CDC42EP3Q9UKI2 254 aa14.61□□□□□ -0.07
LRRC28-210ENST00000558879 FBN1P35555 2871 aaKnown RBP14.61□□□□□ -0.07
LRRC28-210ENST00000558879 MXRA5Q9NR99 2828 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 IGLV3-9A0A075B6K5 115 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 TRAV27A0A087WT01 109 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 SLC22A23A1A5C7 686 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 GMNCA6NCL1 334 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 SAGP10523 405 aaPredicted RBP14.6□□□□□ -0.07
LRRC28-210ENST00000558879 APEHP13798 732 aaKnown RBP14.6□□□□□ -0.07
LRRC28-210ENST00000558879 IGFBP5P24593 272 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 PRDX6P30041 224 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 LSP1P33241 339 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 SLC9A3P48764 834 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 CD47Q08722 323 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 TOP3AQ13472 1001 aaPredicted RBP14.6□□□□□ -0.07
LRRC28-210ENST00000558879 CARTPTQ16568 116 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 GKAP1Q5VSY0 366 aaPredicted RBP14.6□□□□□ -0.07
LRRC28-210ENST00000558879 FAM205BPQ63HN1 556 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 RNF113BQ8IZP6 322 aaKnown RBP14.6□□□□□ -0.07
LRRC28-210ENST00000558879 RBM15BQ8NDT2 890 aaKnown RBP14.6□□□□□ -0.07
LRRC28-210ENST00000558879 FNDC8Q8TC99 324 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 UBASH3BQ8TF42 649 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 MSI2Q96DH6 328 aaKnown RBP14.6□□□□□ -0.07
LRRC28-210ENST00000558879 TSPAN32Q96QS1 320 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 KCTD14Q9BQ13 255 aaPredicted RBP14.6□□□□□ -0.07
LRRC28-210ENST00000558879 ELAC2Q9BQ52 826 aaKnown RBP14.6□□□□□ -0.07
LRRC28-210ENST00000558879 SOX7Q9BT81 388 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 MS4A5Q9H3V2 200 aa14.6□□□□□ -0.07
LRRC28-210ENST00000558879 SIAEQ9HAT2 523 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms