RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 PSD2Q9BQI7 771 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ZNF559Q9BR84 538 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 PRRG4Q9BZD6 226 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 PLEKHF2Q9H8W4 249 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 MCCC2Q9HCC0 563 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 BCL2L10Q9HD36 194 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 CHST11Q9NPF2 352 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 ARGLU1Q9NWB6 273 aaPredicted RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 ZNF443Q9Y2A4 671 aaPredicted RBP3.72□□□□□ -1.81
SPG11-211ENST00000558561 PLEKHA6Q9Y2H5 1048 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 NDUFAF1Q9Y375 327 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 CCDC168Q8NDH2 2452 aa3.72□□□□□ -1.81
SPG11-211ENST00000558561 CELSR1Q9NYQ6 3014 aa3.71□□□□□ -1.81
SPG11-211ENST00000558561 HIVEP1P15822 2718 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 IGKV1D-42A0A075B6H8 117 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 A0A087WZY1 265 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 A0A0G2JPF8 293 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 A0A1B0GWA3 101 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 DPRXA6NFQ7 191 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 CFAP73A6NFT4 308 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 TUBAL3A6NHL2 446 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 HNRNPCL2B2RXH8 293 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 HNRNPCL3B7ZW38 293 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 H3BNH8 94 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 SULT2B1O00204 365 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 AIM2O14862 343 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 HNRNPCL1O60812 293 aaKnown RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 SS18L1O75177 396 aaPredicted RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 NPIPB7O75200 414 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 LYZL6O75951 148 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 SOX30O94993 753 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 DBIP07108 87 aaKnown RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 GUSBP08236 651 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 KRT16P08779 473 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 HNRNPCL4P0DMR1 293 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 HLA-DOBP13765 273 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 NCK1P16333 377 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 PGCP20142 388 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 IGHV1-2P23083 117 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 AGTR1P30556 359 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 LCN1P31025 176 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 UGT2B10P36537 528 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 RBMXP38159 391 aaKnown RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 CD79BP40259 229 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 OR1E2P47887 323 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 CDH12P55289 794 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 STX1BP61266 288 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 H3F3AP84243 136 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 LRRC74AQ0VAA2 488 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 RASGEF1BQ0VAM2 473 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 SCARB2Q14108 478 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 OR1Q1Q15612 314 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 OR7A5Q15622 319 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 FBXL19-AS1Q494R0 122 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 SYT14P1Q58G82 188 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 GCNT6Q5T4J0 391 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 ATAD3BQ5T9A4 648 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 TSPO2Q5TGU0 170 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 REP15Q6BDI9 236 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 C11orf87Q6NUJ2 197 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 REEP3Q6NUK4 255 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 BHLHB9Q6PI77 547 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 CHMP1BQ7LBR1 199 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 PIGWQ7Z7B1 504 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 DHDDSQ86SQ9 333 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 EPHX4Q8IUS5 362 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 MISPQ8IVT2 679 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 NKAIN4Q8IVV8 208 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 DPP10Q8N608 796 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 LRRC17Q8N6Y2 441 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 RNF148Q8N7C7 305 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 OR6T1Q8NGN1 323 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 VANGL1Q8TAA9 524 aaPredicted RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 HTRA1Q92743 480 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 EME1Q96AY2 570 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 TAMM41Q96BW9 452 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 SLC25A36Q96CQ1 311 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 RCN3Q96D15 328 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 MSI2Q96DH6 328 aaKnown RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 POLDIP3Q9BY77 421 aaKnown RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 FAM107BQ9H098 131 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 KAT8Q9H7Z6 458 aaKnown RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 RMND5AQ9H871 391 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 A4GALTQ9NPC4 353 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 PAPOLBQ9NRJ5 636 aaKnown RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 RASSF1Q9NS23 344 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 NPAP1Q9NZP6 1156 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 MSRB1Q9NZV6 116 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 RNF7Q9UBF6 113 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 LEF1Q9UJU2 399 aaPredicted RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 PROCRQ9UNN8 238 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 LAMP3Q9UQV4 416 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 LIPT1Q9Y234 373 aa3.71□□□□□ -1.82
SPG11-211ENST00000558561 RAI1Q7Z5J4 1906 aaPredicted RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 YLPM1P49750 1951 aaKnown RBP3.71□□□□□ -1.82
SPG11-211ENST00000558561 OTOGQ6ZRI0 2925 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 DPPA5A6NC42 116 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 LIPT2A6NK58 231 aa3.7□□□□□ -1.82
SPG11-211ENST00000558561 CPSF4LA6NMK7 179 aaKnown RBP3.7□□□□□ -1.82
SPG11-211ENST00000558561 A6NNC1 897 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms