RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 VPS13CQ709C8 3753 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 A0A1W2PQ09 198 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 A0A1W2PQL4 384 aaPredicted RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 MBD3L4A6NDZ8 208 aaPredicted RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 MBD3L3A6NE82 208 aaPredicted RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 FABP12A6NFH5 140 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 HMX3A6NHT5 357 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 MBD3L5A6NJ08 208 aaPredicted RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 CD8B2A6NJW9 211 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 ZIC3O60481 467 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 EIF4E2O60573 245 aaKnown RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 IL2RAP01589 272 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 HLA-DPB1P04440 258 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 UBL4AP11441 157 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 PRG2P13727 222 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 CPN1P15169 458 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 CD53P19397 219 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 S100A1P23297 94 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 ACAA2P42765 397 aaKnown RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 RFX2P48378 723 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 AGFG1P52594 562 aaKnown RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 CLDN18P56856 261 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 RPS25P62851 125 aaKnown RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 SRYQ05066 204 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 SKP2Q13309 424 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 RPL13AP3Q6NVV1 102 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 ZNF620Q6ZNG0 422 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 NRARPQ7Z6K4 114 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 ADGRE4PQ86SQ3 457 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 RNF113BQ8IZP6 322 aaKnown RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 RDH10Q8IZV5 341 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 LSMEM1Q8N8F7 131 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 OR2M3Q8NG83 312 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 OR4Q3Q8NH05 313 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 MBD3L2Q8NHZ7 208 aaPredicted RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 ZPLD1Q8TCW7 415 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 C1GALT1C1Q96EU7 318 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 SLC41A3Q96GZ6 507 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 FAM46AQ96IP4 442 aaKnown RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 DOCK7Q96N67 2140 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 SFXN2Q96NB2 322 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 SOSTQ9BQB4 213 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 KATNB1Q9BVA0 655 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 LAT2Q9GZY6 243 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 CALHM2Q9HA72 323 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 NEK6Q9HC98 313 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 MED11Q9P086 117 aa9.21□□□□□ -0.94
TPM1-212ENST00000558347 MRPS18CQ9Y3D5 142 aaKnown RBP9.21□□□□□ -0.94
TPM1-212ENST00000558347 TRAPPC13A5PLN9 417 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 FAM172BPA6NC97 362 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 CPSF4LA6NMK7 179 aaKnown RBP9.2□□□□□ -0.94
TPM1-212ENST00000558347 DVL2O14641 736 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 ZNF264O43296 627 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 GKN3PP0CG01 181 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 DPP4P27487 766 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 HTR2AP28223 471 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 CAPZA2P47755 286 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 DSCR4P56555 118 aaPredicted RBP9.2□□□□□ -0.94
TPM1-212ENST00000558347 B3GALT5-AS1P59052 145 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 SF3B4Q15427 424 aaKnown RBP eCLIP9.2□□□□□ -0.941e-9■■□□□ 12.9
TPM1-212ENST00000558347 CD226Q15762 336 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 BAK1Q16611 211 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 SLC35F1Q5T1Q4 408 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 OR2G6Q5TZ20 316 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 MZT2AQ6P582 158 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 ZNF613Q6PF04 617 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 MARCH3Q86UD3 253 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 SLC43A2Q8N370 569 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 ARIH2OSQ8N7S6 290 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 OR2T33Q8NG76 320 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 OR4K17Q8NGC6 315 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 PHOSPHO1Q8TCT1 267 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 GATAD2BQ8WXI9 593 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 ACOT12Q8WYK0 555 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 ZC3HAV1LQ96H79 300 aaKnown RBP9.2□□□□□ -0.94
TPM1-212ENST00000558347 DIRAS2Q96HU8 199 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 TBL1XR1Q9BZK7 514 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 TRIM2Q9C040 744 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 INPP5EQ9NRR6 644 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 ZNF629Q9UEG4 869 aaPredicted RBP9.2□□□□□ -0.94
TPM1-212ENST00000558347 KCNN3Q9UGI6 736 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 POU2F3Q9UKI9 436 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 CARD8Q9Y2G2 431 aa9.2□□□□□ -0.94
TPM1-212ENST00000558347 ANKRD17O75179 2603 aaKnown RBP9.19□□□□□ -0.94
TPM1-212ENST00000558347 CCDC182A6NF36 153 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 J3QRE1 110 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 GTPBP1O00178 669 aaKnown RBP9.19□□□□□ -0.94
TPM1-212ENST00000558347 NDUFB5O43674 189 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 TMCC2O75069 709 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 ADAM11O75078 769 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 LYPD3O95274 346 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 THY1P04216 161 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 CSF3P09919 207 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 GSTT2P0CG29 244 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 GSTT2BP0CG30 244 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 ZNF708P17019 499 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 UQCRC1P31930 480 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 SLC6A8P48029 635 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 ASCL1P50553 236 aa9.19□□□□□ -0.94
TPM1-212ENST00000558347 RNF144AP50876 292 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms