RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 PTRH2Q9Y3E5 179 aaKnown RBP9.49□□□□□ -0.89
TPM1-210ENST00000558264 RALGAPA1Q6GYQ0 2036 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 CCDC163A0A0D9SF12 145 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 PMS2P1A4D2B8 440 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 NPIPA5E9PKD4 350 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 FCER2P06734 321 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 TMIGD3P0DMS9 266 aaPredicted RBP9.48□□□□□ -0.89
TPM1-210ENST00000558264 PTGDSP41222 190 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 ZNF41P51814 821 aaPredicted RBP9.48□□□□□ -0.89
TPM1-210ENST00000558264 ZXDAP98168 799 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 SF3B4Q15427 424 aaKnown RBP eCLIP9.48□□□□□ -0.891e-9■■□□□ 12.9
TPM1-210ENST00000558264 HYAL4Q2M3T9 481 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 PYHIN1Q6K0P9 492 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 LYPD8Q6UX82 237 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 LINGO2Q7L985 606 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 GPAT4Q86UL3 456 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 C1orf210Q8IVY1 113 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 SIAH3Q8IW03 269 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 EXPH5Q8NEV8 1989 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 RPS4Y2Q8TD47 263 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 SLC7A6Q92536 515 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 SLC25A38Q96DW6 304 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 PRMT8Q9NR22 394 aaPredicted RBP9.48□□□□□ -0.89
TPM1-210ENST00000558264 NPIPA1Q9UND3 350 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 FKBP7Q9Y680 259 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 V9GY05 133 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 TNRC6BQ9UPQ9 1833 aaKnown RBP9.48□□□□□ -0.89
TPM1-210ENST00000558264 SMLR1H3BR10 107 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 OR2T1O43869 369 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 ITGA10O75578 1167 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 MT-ND4P03905 459 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 BTCP35070 178 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 CCR6P51684 374 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 ZFP69Q49AA0 526 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 MRPL14Q6P1L8 145 aaKnown RBP9.48□□□□□ -0.89
TPM1-210ENST00000558264 NUP54Q7Z3B4 507 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 KRT77Q7Z794 578 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 ZNF248Q8NDW4 579 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 OR5L2Q8NGL0 311 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 POC1BQ8TC44 478 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 STK35Q8TDR2 534 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 YIPF5Q969M3 257 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 GAL3ST1Q99999 423 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 ABHD6Q9BV23 337 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 BEX1Q9HBH7 125 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 MRPL39Q9NYK5 338 aaKnown RBP9.48□□□□□ -0.89
TPM1-210ENST00000558264 ABRACLQ9P1F3 81 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 SPATA2Q9UM82 520 aa9.48□□□□□ -0.89
TPM1-210ENST00000558264 PCDHGA9Q9Y5G4 932 aaKnown RBP9.48□□□□□ -0.89
TPM1-210ENST00000558264 EML6Q6ZMW3 1958 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 HMX3A6NHT5 357 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 AIPO00170 330 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 TRIM3O75382 744 aaPredicted RBP9.47□□□□□ -0.89
TPM1-210ENST00000558264 PTBP1P26599 531 aaKnown RBP eCLIP9.47□□□□□ -0.895e-7■■■□□ 15.6
TPM1-210ENST00000558264 RPS18P62269 152 aaKnown RBP9.47□□□□□ -0.89
TPM1-210ENST00000558264 MYBPHQ13203 477 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 NTRK2Q16620 822 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 SLC36A2Q495M3 483 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 BCL2L15Q5TBC7 163 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 CARD17Q5XLA6 110 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 TMEM205Q6UW68 189 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 MISPQ8IVT2 679 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 TOMM5Q8N4H5 51 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 ZNF486Q96H40 463 aaPredicted RBP9.47□□□□□ -0.89
TPM1-210ENST00000558264 C4orf45Q96LM5 186 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 OR8B4Q96RC9 309 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 COMMD4Q9H0A8 199 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 TP63Q9H3D4 680 aaPredicted RBP9.47□□□□□ -0.89
TPM1-210ENST00000558264 PLSCR3Q9NRY6 295 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 NUDT15Q9NV35 164 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 OR5V1Q9UGF6 321 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 GPN3Q9UHW5 284 aaPredicted RBP9.47□□□□□ -0.89
TPM1-210ENST00000558264 SSUH2Q9Y2M2 353 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 WIF1Q9Y5W5 379 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 CACNG2Q9Y698 323 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 LOC101059948A0A1B0GTJ6 334 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 ANXA2P2A6NMY6 339 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 ZNF814B7Z6K7 855 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 INMT-MINDY4F8WBC2 141 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 RAMP1O60894 148 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 ANXA2P07355 339 aaKnown RBP9.47□□□□□ -0.89
TPM1-210ENST00000558264 UMODP07911 640 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 HOXA6P31267 233 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 BIDP55957 195 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 CLDN20P56880 219 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 HSF1Q00613 529 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 EGR3Q06889 387 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 SLC17A1Q14916 467 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 PCOLCEQ15113 449 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 PLPPR5Q32ZL2 321 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 SLC18B1Q6NT16 456 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 NCCRP1Q6ZVX7 275 aaPredicted RBP9.47□□□□□ -0.89
TPM1-210ENST00000558264 H1FNTQ75WM6 255 aaPredicted RBP9.47□□□□□ -0.89
TPM1-210ENST00000558264 KCTD20Q7Z5Y7 419 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 GLB1L2Q8IW92 636 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 DUSP18Q8NEJ0 188 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 SYNPRQ8TBG9 265 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 ST8SIA1Q92185 356 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 OR5B2Q96R09 309 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms