RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 VWA2Q5GFL6 755 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 MPZL3Q6UWV2 235 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 MRPL41Q8IXM3 137 aaKnown RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 FRMD1Q8N878 549 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 OR14K1Q8NGZ2 314 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 RHEBL1Q8TAI7 183 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 TNFAIP8L1Q8WVP5 186 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 TIFAQ96CG3 184 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 SLC35E1Q96K37 410 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 SEPT5Q99719 369 aaPredicted RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 GPR87Q9BY21 358 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 CREBZFQ9NS37 354 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 ACER3Q9NUN7 267 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 USP36Q9P275 1121 aaKnown RBP10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 TSPAN16Q9UKR8 245 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 CLDN16Q9Y5I7 305 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 POMT1Q9Y6A1 747 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 MGAMO43451 1857 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 LOC285556D6RIA3 1793 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 ANKRD36A6QL64 1941 aa10.06□□□□□ -0.8
SEMA4B-204ENST00000558065 PCDH7O60245 1069 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 MMP2P08253 660 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 ERVFRD-1P60508 538 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 SCGB2A2Q13296 93 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 FZD5Q13467 585 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 BATFQ16520 125 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 FAM27D1Q5T7N8 215 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 KLHL24Q6TFL4 600 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF280BQ86YH2 543 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 STXBP6Q8NFX7 210 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 ASB17Q8WXJ9 295 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 SMIM12Q96EX1 92 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 C16orf58Q96GQ5 468 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 HPDLQ96IR7 371 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 IPPKQ9H8X2 491 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 MRPS18AQ9NVS2 196 aaKnown RBP10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 GALPQ9UBC7 116 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 C19orf53Q9UNZ5 99 aaPredicted RBP10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 TTC3P53804 2025 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 FAM227AF5H4B4 570 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 CILPO75339 1184 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 DDNO94850 711 aaPredicted RBP10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 SELENOVP59797 346 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 ERVPABLB-1P60509 514 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 RPL38P63173 70 aaKnown RBP10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 ATXN7L3Q14CW9 347 aaPredicted RBP10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 APCDD1Q8J025 514 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 TMEM234Q8WY98 164 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 SLC22A12Q96S37 553 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 DOHHQ9BU89 302 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 DPY30Q9C005 99 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 EXO5Q9H790 373 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 SLC25A13Q9UJS0 675 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 PITPNC1Q9UKF7 332 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 RNF115Q9Y4L5 304 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 ZFP37Q9Y6Q3 630 aaPredicted RBP10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 SERPINE3A8MV23 424 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 HCRTO43612 131 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 GCM2O75603 506 aaPredicted RBP10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 GJB3O75712 270 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 SOX14O95416 240 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 PPP1R3DO95685 299 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 DCTDP32321 178 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 TNFSF9P41273 254 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 HSF1Q00613 529 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 GBGT1Q8N5D6 347 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 OR5D16Q8NGK9 328 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 TMEM19Q96HH6 336 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF479Q96JC4 524 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 SNX22Q96L94 193 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF582Q96NG8 517 aaPredicted RBP10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 PHB2Q99623 299 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 DPH1Q9BZG8 443 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 LINC00597Q9H2U6 94 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 THSD1Q9NS62 852 aa10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 RYDENQ9NUL5 291 aaKnown RBP10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF106Q9H2Y7 1883 aaKnown RBP10.05□□□□□ -0.8
SEMA4B-204ENST00000558065 LOC100289279A0A1B0GTE1 492 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 A0A1B0GTI1 187 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 SNRPBP14678 240 aaKnown RBP10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 WDR5P61964 334 aaKnown RBP10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 CHIT1Q13231 466 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 CCSMST1Q4G0I0 132 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 IL27RAQ6UWB1 636 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 ZNF836Q6ZNA1 936 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 ACOT1Q86TX2 421 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 LMNTD1Q8N9Z9 388 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 OR1J2Q8NGS2 313 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 CD300LFQ8TDQ1 290 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 ADAMTS17Q8TE56 1095 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 SMARCD2Q92925 531 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 ARV1Q9H2C2 271 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 ADGRL4Q9HBW9 690 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 SRPK3Q9UPE1 567 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 PDE4DIPQ5VU43 2346 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 YDJCA8MPS7 323 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 F6UZH7 168 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 HPRT1P00492 218 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 OR1E2P47887 323 aa10.04□□□□□ -0.8
SEMA4B-204ENST00000558065 ID4P47928 161 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms