RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 GLB1L2Q8IW92 636 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 OR51G2Q8NGK0 314 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 NSMAFQ92636 917 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 TMEM80Q96HE8 168 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 RHNO1Q9BSD3 238 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 CCDC90BQ9GZT6 254 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 SCOCQ9UIL1 159 aa14.93□□□□□ -0.02
SNX1-203ENST00000558040 EXOGQ9Y2C4 368 aaKnown RBP14.93□□□□□ -0.02
SNX1-203ENST00000558040 COA3Q9Y2R0 106 aaPredicted RBP14.93□□□□□ -0.02
SNX1-203ENST00000558040 FAM171A2A8MVW0 826 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 IL2RAP01589 272 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 STSP08842 583 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 SBK2P0C263 348 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 DCKP27707 260 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 NTF4P34130 210 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 TIMP3P35625 211 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 GUCA1AP43080 201 aaPredicted RBP14.92□□□□□ -0.02
SNX1-203ENST00000558040 CDH15P55291 814 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 ACTC1P68032 377 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 ACTA1P68133 377 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 RTL6Q6ICC9 239 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 LRFN4Q6PJG9 635 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 B3GLCTQ6Y288 498 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 ABHD12BQ7Z5M8 362 aaPredicted RBP14.92□□□□□ -0.02
SNX1-203ENST00000558040 DOLPP1Q86YN1 238 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 GCNT2Q8N0V5 402 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 SVOPQ8N4V2 548 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 OR52I1Q8NGK6 324 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 MRPS26Q9BYN8 205 aaKnown RBP14.92□□□□□ -0.02
SNX1-203ENST00000558040 ADGRL4Q9HBW9 690 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 FGF20Q9NP95 211 aaPredicted RBP14.92□□□□□ -0.02
SNX1-203ENST00000558040 CHCHD3Q9NX63 227 aaKnown RBP14.92□□□□□ -0.02
SNX1-203ENST00000558040 ERVK-18Q9QC07 812 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 UPB1Q9UBR1 384 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 DIMT1Q9UNQ2 313 aaKnown RBP14.92□□□□□ -0.02
SNX1-203ENST00000558040 FAM215AQ9Y5M1 114 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 LAMA5O15230 3695 aa14.92□□□□□ -0.02
SNX1-203ENST00000558040 A0A1W2PPL8 197 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 DHHO43323 396 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 MRPL3P09001 348 aaKnown RBP14.91□□□□□ -0.02
SNX1-203ENST00000558040 MYL12AP19105 171 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 LAP3P28838 519 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 TUBA4AP68366 448 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 SIRPAP78324 504 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 HSF2Q03933 536 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 DBPQ10586 325 aaPredicted RBP14.91□□□□□ -0.02
SNX1-203ENST00000558040 GUSBP1Q15486 140 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 STK11Q15831 433 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 ETFDHQ16134 617 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 SLC16A9Q7RTY1 509 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 NUFIP2Q7Z417 695 aaKnown RBP14.91□□□□□ -0.02
SNX1-203ENST00000558040 OR4F15Q8NGB8 312 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 OR6K3Q8NGY3 331 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 ZNRF4Q8WWF5 429 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 SGCDQ92629 289 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 ALKBH3Q96Q83 286 aaPredicted RBP14.91□□□□□ -0.02
SNX1-203ENST00000558040 INTS14Q96SY0 518 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 MNTQ99583 582 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 C12orf49Q9H741 205 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 MARCH7Q9H992 704 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 VCX3AQ9NNX9 186 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 INPP5EQ9NRR6 644 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 EXOSC1Q9Y3B2 195 aaKnown RBP14.91□□□□□ -0.02
SNX1-203ENST00000558040 COMMD3-BMI1R4GMX3 469 aa14.91□□□□□ -0.02
SNX1-203ENST00000558040 IGKV1D-43A0A0B4J1Z2 117 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 ZNF587BE7ETH6 402 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 UPK3AO75631 287 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 APOL3O95236 402 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 MT-ND2P03891 347 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 HRGP04196 525 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 TMIGD3P0DMS9 266 aaPredicted RBP14.9□□□□□ -0.02
SNX1-203ENST00000558040 ZNF823P16415 610 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 NAA10P41227 235 aaPredicted RBP14.9□□□□□ -0.02
SNX1-203ENST00000558040 OR3A2P47893 321 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 PHYHD1Q5SRE7 291 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 TSPO2Q5TGU0 170 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 SEM1Q6ZVN7 128 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 SHFQ7M4L6 423 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 ERI1Q8IV48 349 aaKnown RBP14.9□□□□□ -0.02
SNX1-203ENST00000558040 UBE2J2Q8N2K1 259 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 ACBD7Q8N6N7 88 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 CNEP1R1Q8N9A8 125 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 ZNF511Q8NB15 262 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 SLC26A10Q8NG04 563 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 OR10H5Q8NGA6 315 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 SIGLEC11Q96RL6 698 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 MYCBPQ99417 103 aaPredicted RBP14.9□□□□□ -0.02
SNX1-203ENST00000558040 TTYH2Q9BSA4 534 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 RBM24Q9BX46 236 aaKnown RBP14.9□□□□□ -0.02
SNX1-203ENST00000558040 JAM3Q9BX67 310 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 CDCA4Q9BXL8 241 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 YIPF3Q9GZM5 350 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 CRLF2Q9HC73 371 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 TINAGQ9UJW2 476 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 PKD1L2Q7Z442 2459 aa14.9□□□□□ -0.02
SNX1-203ENST00000558040 TPRP12270 2363 aaKnown RBP14.9□□□□□ -0.02
SNX1-203ENST00000558040 MAP1BP46821 2468 aaKnown RBP14.89□□□□□ -0.03
SNX1-203ENST00000558040 GTF3C1Q12789 2109 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 TVP23AA6NH52 213 aa14.89□□□□□ -0.03
SNX1-203ENST00000558040 EIF4E1BA6NMX2 242 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms