RNA–Protein interactions for RNA: ENST00000557764.5

TRAPPC6B-207, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 2

Gene TRAPPC6B, Length 870 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-207ENST00000557764 NCF2P19878 526 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 RPS4Y1P22090 263 aaKnown RBP11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 CBLP22681 906 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 GRPRP30550 384 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 LIPAP38571 399 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 SMU1Q2TAY7 513 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 MS4A18Q3C1V0 323 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 NRN1LQ496H8 165 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 ZYG11AQ6WRX3 759 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 TIFABQ6ZNK6 161 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 KLBQ86Z14 1044 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 RIMKLAQ8IXN7 391 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 MUC20Q8N307 709 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 FITM2Q8N6M3 262 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 VPS37AQ8NEZ2 397 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 OR4A15Q8NGL6 344 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 TAAR8Q969N4 342 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 RAB17Q9H0T7 212 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 MTHFD2LQ9H903 347 aaPredicted RBP11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 TMEM165Q9HC07 324 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 ACOXLQ9NUZ1 547 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 DNAJC15Q9Y5T4 150 aa11.92□□□□□ -0.5
TRAPPC6B-207ENST00000557764 CENPVL3A0A0U1RRI6 287 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 IQCMA0A1B0GVH7 501 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 CDHR4A6H8M9 788 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 ZNF726A6NNF4 738 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 FZD7O75084 574 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 PEX11AO75192 247 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 PRG2P13727 222 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 PRPS1L1P21108 318 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 CCNOP22674 350 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 ARRB2P32121 409 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 OR4F3Q6IEY1 312 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 SLC25A40Q8TBP6 338 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 GATAD2BQ8WXI9 593 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 PLEKHA8Q96JA3 519 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 TRNT1Q96Q11 434 aaKnown RBP11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 KIF17Q9P2E2 1029 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 PRDM4Q9UKN5 801 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 EMCNQ9ULC0 261 aa11.91□□□□□ -0.5
TRAPPC6B-207ENST00000557764 HMGN4O00479 90 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 C1QCP02747 245 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 NQO1P15559 274 aaKnown RBP11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 CPT2P23786 658 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 CRHR1P34998 444 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 CSNK1A1P48729 337 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 DNAJB13P59910 316 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 XKR7Q5GH72 579 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 IL23RQ5VWK5 629 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 MBNL2Q5VZF2 373 aaKnown RBP11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 KANK2Q63ZY3 851 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 SLC27A4Q6P1M0 643 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 LRRC74BQ6ZQY2 392 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 LDLRAD3Q86YD5 345 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 ZNF101Q8IZC7 436 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 SPATA4Q8NEY3 305 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 KLF14Q8TD94 323 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 LRTOMTQ8WZ04 291 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 SAMD8Q96LT4 415 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 PPP3R2Q96LZ3 170 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 SLC19A3Q9BZV2 496 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 TRIM15Q9C019 465 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 OR2J1Q9GZK6 312 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 DPAGT1Q9H3H5 408 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 ZDHHC18Q9NUE0 388 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 CGGBP1Q9UFW8 167 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 FOXJ3Q9UPW0 622 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 PPP1R3CQ9UQK1 317 aa11.9□□□□□ -0.5
TRAPPC6B-207ENST00000557764 A0A0U1RQK1 487 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 TMEM178BH3BS89 294 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 P2RY10O00398 339 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 OR2T1O43869 369 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 MGRN1O60291 552 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 NPHS1O60500 1241 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 ZNF205O95201 554 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 FARS2O95363 451 aaKnown RBP11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 CPSF4O95639 269 aaKnown RBP11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 APLNRP35414 380 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 PLP2Q04941 152 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 CDK5R2Q13319 367 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 SLC36A2Q495M3 483 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 ZMAT1Q5H9K5 638 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 COX20Q5RI15 118 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 FAM69AQ5T7M9 428 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 SLC35E4Q6ICL7 350 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 NHLRC1Q6VVB1 395 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 WDR88Q6ZMY6 472 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 ZNF836Q6ZNA1 936 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 SLC16A14Q7RTX9 510 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 VRK2Q86Y07 508 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 PEX5LQ8IYB4 626 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 LYG1Q8N1E2 194 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 GALNT4Q8N4A0 578 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 ADPRHL1Q8NDY3 354 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 OR4S1Q8NGB4 309 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 TWIST2Q8WVJ9 160 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 CFHR4Q92496 578 aa11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 NEIL1Q96FI4 390 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC6B-207ENST00000557764 A4GALTQ9NPC4 353 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms