RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 HRKO00198 91 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 FOXS1O43638 330 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 RENP00797 406 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 CD8AP01732 235 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 F13BP05160 661 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 FBXO45P0C2W1 286 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 KIR3DL2P43630 455 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 FNTBP49356 437 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 LCN6P62502 163 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 FLI1Q01543 452 aaPredicted RBP10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 MC2RQ01718 297 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 NFATC4Q14934 902 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 GLT8D1Q68CQ7 371 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 TANGO2Q6ICL3 276 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 MOB3CQ70IA8 216 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 TMED4Q7Z7H5 227 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 BIVMQ86UB2 503 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 CCDC36Q8IYA8 594 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 KCNRGQ8N5I3 272 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 TMEM229BQ8NBD8 167 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 MOGAT1Q96PD6 335 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 INTS14Q96SY0 518 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 TMEM185BQ9H7F4 350 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 MYOZ1Q9NP98 299 aaPredicted RBP10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 MMP25Q9NPA2 562 aa10.71□□□□□ -0.69
VIPAS39-211ENST00000557658 FANCMQ8IYD8 2048 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 A0A0J9YY10 115 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 A6NCN8 305 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 OR5H14A6NHG9 310 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 OR2F2O95006 317 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 CCKBRP32239 447 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 DMWDQ09019 674 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 OR2F1Q13607 317 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF345Q14585 488 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 KCNAB1Q14722 419 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 GRM7Q14831 915 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 WDR38Q5JTN6 314 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 FAM74A1Q5RGS3 127 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 LIN54Q6MZP7 749 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 LPCAT3Q6P1A2 487 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 BCORP1Q8N888 145 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 OR9A4Q8NGU2 314 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 NKX6-2Q9C056 277 aaPredicted RBP10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 KCNK15Q9H427 330 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 BARX1Q9HBU1 254 aaPredicted RBP10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 COMMD9Q9P000 198 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 ERVK-19Q9WJR5 959 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 PRELID3BQ9Y3B1 194 aa10.71□□□□□ -0.7
VIPAS39-211ENST00000557658 CACNA1CQ13936 2221 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 ARPC4-TTLL3A0A0A6YYG9 625 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 TTLL8A6PVC2 850 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 CNR1P21554 472 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 FCARP24071 287 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 RPS27P42677 84 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 SEC13P55735 322 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 MESTQ5EB52 335 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 PDSS1Q5T2R2 415 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 EEF1A1P5Q5VTE0 462 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 ELP2Q6IA86 826 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 ATG4DQ86TL0 474 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 LINC00518Q8N0U6 118 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 BPIFCQ8NFQ6 507 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 OR5M8Q8NGP6 311 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 SEH1LQ96EE3 360 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 TSPAN32Q96QS1 320 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 SLC6A17Q9H1V8 727 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 SFXN1Q9H9B4 322 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 SCPEP1Q9HB40 452 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF230Q9UIE0 474 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 C2orf16Q68DN1 1984 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 FAM74A7A6NL05 159 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 BCL2L11O43521 198 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 AMY2AP04746 511 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 ASAH2BP0C7U1 165 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 CT45A8P0DMV1 189 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 CT45A9P0DMV2 189 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 SLC25A4P12235 298 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 LUMP51884 338 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 RPL18Q07020 188 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 FAM74A3Q4VXF1 159 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 CT45A2Q5DJT8 189 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 PABPC1L2AQ5JQF8 200 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 JMJD6Q6NYC1 403 aaPredicted RBP10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 FDX2Q6P4F2 183 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 YAF2Q8IY57 180 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 FAM131CQ96AQ9 280 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 PHYHIPLQ96FC7 376 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 NARS2Q96I59 477 aaKnown RBP10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 LPAR4Q99677 370 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 HPF1Q9NWY4 346 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 EPHA6Q9UF33 1036 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 TNFSF18Q9UNG2 199 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF175Q9Y473 711 aa10.7□□□□□ -0.7
VIPAS39-211ENST00000557658 A0A1B0GTI1 187 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 CD34P28906 385 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 CCR4P51679 360 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 SRSF4Q08170 494 aaKnown RBP10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 KLHL26Q53HC5 615 aa10.69□□□□□ -0.7
VIPAS39-211ENST00000557658 CCDC157Q569K6 752 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms