RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 ZNF346Q9UL40 294 aaKnown RBP6.84□□□□□ -1.31
PSEN1-222ENST00000557356 SIGLEC7Q9Y286 467 aa6.84□□□□□ -1.31
PSEN1-222ENST00000557356 V9GYQ6 96 aa6.84□□□□□ -1.31
PSEN1-222ENST00000557356 SPENQ96T58 3664 aaKnown RBP6.84□□□□□ -1.31
PSEN1-222ENST00000557356 FREM1Q5H8C1 2179 aa6.84□□□□□ -1.32
PSEN1-222ENST00000557356 TRAV27A0A087WT01 109 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 C12orf71A8MTZ7 269 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 B9A039 149 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 E7EQL1 145 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 TNFRSF11BO00300 401 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 GNGT2O14610 69 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 CDC42EP2O14613 210 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 ARPC3O15145 178 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 PIP5K1CO60331 668 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 UBOX5O94941 541 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 DIRAS1O95057 198 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 CCNB2O95067 398 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 HLA-HP01893 362 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 CECR9P0C854 216 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 GSTM3P21266 225 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 FPR3P25089 353 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 NOS3P29474 1203 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 CRABP1P29762 137 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 SDHAP31040 664 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 RAD52P43351 418 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 MAGEA2P43356 314 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 GPR4P46093 362 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 OMPP47874 163 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 LIMS1P48059 325 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 PTDSS1P48651 473 aaKnown RBP6.83□□□□□ -1.32
PSEN1-222ENST00000557356 EVX1P49640 407 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 IDH3GP51553 393 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-222ENST00000557356 SNRPD2P62316 118 aaKnown RBP6.83□□□□□ -1.32
PSEN1-222ENST00000557356 MS4A2Q01362 244 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 PIGFQ07326 219 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 COX10Q12887 443 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 NPRL3Q12980 569 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 BNIP1Q12981 228 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 TSPAN31Q12999 210 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 TOP3AQ13472 1001 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-222ENST00000557356 DAG1Q14118 895 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 SGCAQ16586 387 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 MOGQ16653 247 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 ZSCAN26Q16670 478 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 PGGHGQ32M88 737 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 RFX4Q33E94 735 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 OR2T5Q6IEZ7 315 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 PGM2L1Q6PCE3 622 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 ARL9Q6T311 187 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 YTHDF3Q7Z739 585 aaKnown RBP6.83□□□□□ -1.32
PSEN1-222ENST00000557356 ZER1Q7Z7L7 766 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 MDP1Q86V88 176 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 SKA3Q8IX90 412 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 FAM86B1Q8N7N1 296 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 OR13C2Q8NGS9 318 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 OR2T29Q8NH02 315 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 IGFBPL1Q8WX77 278 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 HDAC2Q92769 488 aaKnown RBP6.83□□□□□ -1.32
PSEN1-222ENST00000557356 PERPQ96FX8 193 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 FAM46AQ96IP4 442 aaKnown RBP6.83□□□□□ -1.32
PSEN1-222ENST00000557356 RSRC1Q96IZ7 334 aaKnown RBP6.83□□□□□ -1.32
PSEN1-222ENST00000557356 ZNF570Q96NI8 536 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 SNX18Q96RF0 628 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 GPX7Q96SL4 187 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-222ENST00000557356 FUZQ9BT04 418 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 TRAF4Q9BUZ4 470 aaPredicted RBP6.83□□□□□ -1.32
PSEN1-222ENST00000557356 NELFAQ9H3P2 528 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 CA10Q9NS85 328 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 TIMM10BQ9Y5J6 103 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 NAV2Q8IVL1 2488 aa6.83□□□□□ -1.32
PSEN1-222ENST00000557356 UTP20O75691 2785 aaKnown RBP6.82□□□□□ -1.32
PSEN1-222ENST00000557356 TCRBV5S2A0A599 114 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 PRSS37A4D1T9 235 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 ATP6V1G2-DDX39BF2Z307 99 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 H7C417 338 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 ACOT8O14734 319 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 KHDRBS3O75525 346 aaKnown RBP6.82□□□□□ -1.32
PSEN1-222ENST00000557356 TXNDC12O95881 172 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 RENP00797 406 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 SOD3P08294 240 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 CST2P09228 141 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 CSF3P09919 207 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 ZNF14P17017 642 aaPredicted RBP6.82□□□□□ -1.32
PSEN1-222ENST00000557356 NR4A1P22736 598 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 TUBG1P23258 451 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 APLNRP35414 380 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 GIPRP48546 466 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 ERVK-25P63136 954 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 HSF2Q03933 536 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 RUNX1T1Q06455 604 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 FLOT2Q14254 428 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 EFNB3Q15768 340 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 MICAQ29983 383 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 TBC1D28Q2M2D7 210 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 Q5PR19 223 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 SLC25A47Q6Q0C1 308 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 C10orf67Q8IYJ2 551 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 OR52L1Q8NGH7 329 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 ZNF519Q8TB69 540 aa6.82□□□□□ -1.32
PSEN1-222ENST00000557356 IPCEF1Q8WWN9 437 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms