RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 FAIMQ9NVQ4 179 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 TMEM38BQ9NVV0 291 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 SLC7A8Q9UHI5 535 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 FBXL3Q9UKT7 428 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 MOKQ9UQ07 419 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 LAMP3Q9UQV4 416 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 ADAM18Q9Y3Q7 739 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 ATP23Q9Y6H3 246 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 PRR14LQ5THK1 2151 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 LRBAP50851 2863 aa9.3□□□□□ -0.92
LINC00239-201ENST00000556973 TACC2O95359 2948 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 TCRBV3S1A0A5B6 114 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 E7EQL1 145 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 GNGT2O14610 69 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 IMPA2O14732 288 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 SLC2A10O95528 541 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 GASTP01350 101 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 CECR9P0C854 216 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 APEHP13798 732 aaKnown RBP9.29□□□□□ -0.92
LINC00239-201ENST00000556973 PAX1P15863 534 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF14P17017 642 aaPredicted RBP9.29□□□□□ -0.92
LINC00239-201ENST00000556973 SLC6A6P31641 620 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 APOBEC3AP31941 199 aaPredicted RBP9.29□□□□□ -0.92
LINC00239-201ENST00000556973 TTKP33981 857 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 GUCA1AP43080 201 aaPredicted RBP9.29□□□□□ -0.92
LINC00239-201ENST00000556973 CDH11P55287 796 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 FXYD6P3P58550 94 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 MRPS34P82930 218 aaKnown RBP9.29□□□□□ -0.92
LINC00239-201ENST00000556973 NAAAQ02083 359 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 SPOCK1Q08629 439 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 PGGHGQ32M88 737 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 SLC36A2Q495M3 483 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 AGAP6Q5VW22 663 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF770Q6IQ21 691 aaPredicted RBP9.29□□□□□ -0.92
LINC00239-201ENST00000556973 RPL13AP3Q6NVV1 102 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF544Q6NX49 715 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 PGBD2Q6P3X8 592 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 THSD4Q6ZMP0 1018 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 SLC16A14Q7RTX9 510 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 SPATA24Q86W54 205 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 PAPD5Q8NDF8 572 aaKnown RBP9.29□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF75AQ96N20 296 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF570Q96NI8 536 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 SH3GL3Q99963 347 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 DHRS9Q9BPW9 319 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 SIAEQ9HAT2 523 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF224Q9NZL3 707 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 IL20RAQ9UHF4 553 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 SAMHD1Q9Y3Z3 626 aaKnown RBP9.29□□□□□ -0.92
LINC00239-201ENST00000556973 UGT2A1Q9Y4X1 527 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 IER3IP1Q9Y5U9 82 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 U3KQV3 271 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 ABCA12Q86UK0 2595 aa9.29□□□□□ -0.92
LINC00239-201ENST00000556973 ANKRD17O75179 2603 aaKnown RBP9.29□□□□□ -0.92
LINC00239-201ENST00000556973 IGKV1D-43A0A0B4J1Z2 117 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 TEX13CA0A0J9YWL9 993 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 SLC22A23A1A5C7 686 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 PRSS37A4D1T9 235 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 VSTM5A8MXK1 200 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 ATP6V1G2-DDX39BF2Z307 99 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 OVOL3O00110 214 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 ARPC3O15145 178 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 IDH3BO43837 385 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 RAB36O95755 333 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 TXNDC12O95881 172 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 PTHP01270 115 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 CD8AP01732 235 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 SOD3P08294 240 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 CELA3BP08861 270 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 PATE4P0C8F1 98 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 CALCRP30988 508 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 PTDSS1P48651 473 aaKnown RBP9.28□□□□□ -0.92
LINC00239-201ENST00000556973 FABP6P51161 128 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 IDH3GP51553 393 aaPredicted RBP9.28□□□□□ -0.92
LINC00239-201ENST00000556973 NKX6-1P78426 367 aaPredicted RBP9.28□□□□□ -0.92
LINC00239-201ENST00000556973 FMODQ06828 376 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 NPRL3Q12980 569 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 SGCAQ16586 387 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 MESTQ5EB52 335 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 FAM27BQ5VT28 67 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 SHEQ5VZ18 495 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 TMEM53Q6P2H8 277 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 ADCK1Q86TW2 530 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 FBXL14Q8N1E6 418 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 MUC15Q8N387 334 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 LRRC18Q8N456 261 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 CLDN22Q8N7P3 220 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 OR4F15Q8NGB8 312 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 OR9Q2Q8NGE9 314 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 NSMAFQ92636 917 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 TRMT61AQ96FX7 289 aaKnown RBP9.28□□□□□ -0.92
LINC00239-201ENST00000556973 ERMAPQ96PL5 475 aaPredicted RBP9.28□□□□□ -0.92
LINC00239-201ENST00000556973 WACQ9BTA9 647 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 TRAF4Q9BUZ4 470 aaPredicted RBP9.28□□□□□ -0.92
LINC00239-201ENST00000556973 GSX2Q9BZM3 304 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 LRMDAQ9H2I8 198 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 OR52D1Q9H346 318 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 RNF121Q9H920 327 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 SEC61A2Q9H9S3 476 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 ZNF701Q9NV72 531 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms