RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 SLC6A2P23975 617 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 EEF1B2P24534 225 aaKnown RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 SPRP35270 261 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 IDH2P48735 452 aaKnown RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 GYS2P54840 703 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 CLDN17P56750 224 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 RAE1P78406 368 aaKnown RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 GUCY1A3Q02108 690 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 GLO1Q04760 184 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 PLP2Q04941 152 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 TRAF3Q13114 568 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 LSAMPQ13449 338 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 C1DQ13901 141 aaKnown RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 ZKSCAN8Q15776 578 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 ZNF141Q15928 474 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 KCTD19Q17RG1 926 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 TBC1D28Q2M2D7 210 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 PDZK1Q5T2W1 519 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 FAM71E1Q6IPT2 247 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 KLC3Q6P597 504 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 KCTD18Q6PI47 426 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 LHFPL2Q6ZUX7 228 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 ZNF627Q7L945 461 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 CCDC91Q7Z6B0 441 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 ZER1Q7Z7L7 766 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 EPHX4Q8IUS5 362 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 OR1J1Q8NGS3 322 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 PPP1R35Q8TAP8 253 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 OIT3Q8WWZ8 545 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 GEMIN6Q8WXD5 167 aaKnown RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 CDKL2Q92772 493 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 CDS1Q92903 461 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 MAGOHBQ96A72 148 aaKnown RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 KIRREL1Q96J84 757 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 GPR78Q96P69 363 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 ZNF382Q96SR6 550 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 LYSTQ99698 3801 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 EXD2Q9NVH0 621 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 ADPRHL2Q9NX46 363 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 SIRT5Q9NXA8 310 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 DCAF16Q9NXF7 216 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 PRDM4Q9UKN5 801 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 CHMP2BQ9UQN3 213 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 SLC35A3Q9Y2D2 325 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 MAB21L2Q9Y586 359 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 TET2Q6N021 2002 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-245ENST00000556958 PCNX3Q9H6A9 2034 aa4.71□□□□□ -1.66
ATXN3-245ENST00000556958 A0A1W2PRX2 142 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 TMEM72A0PK05 275 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 NOTOA8MTQ0 251 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 C22orf46C9J442 243 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 TMEM178BH3BS89 294 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 M0R3G1 203 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 MANBAO00462 879 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 MFN2O95140 757 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 FSTL3O95633 263 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 SNAP29O95721 258 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 HMGN2P05204 90 aaKnown RBP4.7□□□□□ -1.66
ATXN3-245ENST00000556958 THRBP10828 461 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 MMP9P14780 707 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 ZNF26P17031 533 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-245ENST00000556958 NAT1P18440 290 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 CXCR1P25024 350 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 NPY4RP50391 375 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 KRTAP10-2P60368 255 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 BTKQ06187 659 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 DLG1Q12959 904 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 TP53BP2Q13625 1128 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 LASP1Q14847 261 aaKnown RBP4.7□□□□□ -1.66
ATXN3-245ENST00000556958 RASA2Q15283 850 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 SPDYAQ5MJ70 313 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 WDR25Q64LD2 544 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-245ENST00000556958 DPPA2Q7Z7J5 298 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 VRK2Q86Y07 508 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 ARFGAP2Q8N6H7 521 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 VPS37AQ8NEZ2 397 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 IL17DQ8TAD2 202 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 FAM76AQ8TAV0 307 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 GRK7Q8WTQ7 553 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 TFAP2CQ92754 450 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 PHF21BQ96EK2 531 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 OTUB1Q96FW1 271 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-245ENST00000556958 APIPQ96GX9 242 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 LRR1Q96L50 414 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 PRPF18Q99633 342 aaKnown RBP4.7□□□□□ -1.66
ATXN3-245ENST00000556958 KCNJ15Q99712 375 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 CPNE1Q99829 537 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 DESI2Q9BSY9 194 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 DCTN5Q9BTE1 182 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 EBPLQ9BY08 206 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 OR51B6Q9H340 312 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 INPP5EQ9NRR6 644 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 ZCCHC3Q9NUD5 404 aaKnown RBP4.7□□□□□ -1.66
ATXN3-245ENST00000556958 CPSF2Q9P2I0 782 aaKnown RBP4.7□□□□□ -1.66
ATXN3-245ENST00000556958 EIF3KQ9UBQ5 218 aaKnown RBP4.7□□□□□ -1.66
ATXN3-245ENST00000556958 OSGIN1Q9UJX0 560 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 PCTPQ9UKL6 214 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 NDRG4Q9ULP0 352 aaKnown RBP4.7□□□□□ -1.66
ATXN3-245ENST00000556958 TMCO1Q9UM00 188 aa4.7□□□□□ -1.66
ATXN3-245ENST00000556958 KIAA1109Q2LD37 5005 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms