RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 M0R1B8 84 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 TXNDC12O95881 172 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 NR2C1P13056 603 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 APEHP13798 732 aaKnown RBP15.28■□□□□ 0.04
SHMT2-225ENST00000556798 NOS3P29474 1203 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 CDAP32320 146 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 CDKN2AP42771 156 aaKnown RBP15.28■□□□□ 0.04
SHMT2-225ENST00000556798 ZNF84P51523 738 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 SLC36A3Q495N2 470 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 SLC35F1Q5T1Q4 408 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 C10orf128Q5T292 105 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 ZFP1Q6P2D0 407 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 CD300LDQ6UXZ3 194 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 OR4Q3Q8NH05 313 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 OR4K13Q8NH42 304 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 NRBF2Q96F24 287 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 RBP7Q96R05 134 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 PKP2Q99959 881 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 TSSK6Q9BXA6 273 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 SYT4Q9H2B2 425 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 ZNF556Q9HAH1 456 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 NGBQ9NPG2 151 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 REV1Q9UBZ9 1251 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 UGT2A1Q9Y4X1 527 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 ROS1P08922 2347 aa15.28■□□□□ 0.04
SHMT2-225ENST00000556798 LRBAP50851 2863 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 ARPC4-TTLL3A0A0A6YYG9 625 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 DPRXA6NFQ7 191 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 SAC3D1A6NKF1 404 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 G3V2T6 193 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 H3BN98 237 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 BHLHE40O14503 412 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 ARPC3O15145 178 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 WNT11O96014 354 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 HLA-HP01893 362 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 ANXA8P13928 327 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 HIST1H1CP16403 213 aaKnown RBP15.27■□□□□ 0.04
SHMT2-225ENST00000556798 BSPH1Q075Z2 132 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 DBPQ10586 325 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-225ENST00000556798 ETFDHQ16134 617 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 THEM4Q5T1C6 240 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 LEG1Q6P5S2 330 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 ZNF627Q7L945 461 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 ADCK1Q86TW2 530 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 JAZF1Q86VZ6 243 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 SLC22A24Q8N4F4 322 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 IQCF1Q8N6M8 205 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 ICA1LQ8NDH6 482 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 SDR9C7Q8NEX9 313 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 TEX47Q8TBZ9 253 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 CENPNQ96H22 339 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-225ENST00000556798 FOXN4Q96NZ1 517 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 FN3KQ9H479 309 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 RERGLQ9H628 205 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 SMURF2Q9HAU4 748 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 NOX3Q9HBY0 568 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 S100A14Q9HCY8 104 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 OBP2BQ9NPH6 170 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 ZNF224Q9NZL3 707 aa15.27■□□□□ 0.04
SHMT2-225ENST00000556798 POLQO75417 2590 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 A0A1W2PPL8 197 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 GOSR1O95249 250 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 PLAUP00749 431 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 PATE4P0C8F1 98 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 CTLA4P16410 223 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 POU1F1P28069 291 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 DAPP51397 102 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 PIGFQ07326 219 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 SPOCK1Q08629 439 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 COX10Q12887 443 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 NCMAPQ5T1S8 102 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 FAHD1Q6P587 224 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 SSX8Q7RTT4 187 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 CDC20BQ86Y33 519 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 HIPK1Q86Z02 1210 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 SKA3Q8IX90 412 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 OR52E2Q8NGJ4 325 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 FNDC8Q8TC99 324 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 NRGNQ92686 78 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 NMNAT3Q96T66 252 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 SH3GL3Q99963 347 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 ESRP2Q9H6T0 727 aaKnown RBP15.26■□□□□ 0.03
SHMT2-225ENST00000556798 VSX1Q9NZR4 365 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-225ENST00000556798 OAZ3Q9UMX2 235 aa15.26■□□□□ 0.03
SHMT2-225ENST00000556798 ANKRD17O75179 2603 aaKnown RBP15.25■□□□□ 0.03
SHMT2-225ENST00000556798 CELA3BP08861 270 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 OR8G3PP0DMU2 310 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 CD79AP11912 226 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 HOXB1P14653 301 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-225ENST00000556798 NR1H2P55055 460 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.25■□□□□ 0.03
SHMT2-225ENST00000556798 ADAM5Q6NVV9 412 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 MDP1Q86V88 176 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 ZDHHC13Q8IUH4 622 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 SVOPLQ8N434 492 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 LNX2Q8N448 690 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 LRRC18Q8N456 261 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 OR2T33Q8NG76 320 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 FGFBP3Q8TAT2 258 aa15.25■□□□□ 0.03
SHMT2-225ENST00000556798 NABP1Q96AH0 204 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms