RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 C1orf194Q5T5A4 169 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 TMEM236Q5W0B7 351 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 OR52W1Q6IF63 320 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 CCDC144NLQ6NUI1 221 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 ZNF585AQ6P3V2 769 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 MBOAT2Q6ZWT7 520 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 HIST2H3AQ71DI3 136 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 CHST9Q7L1S5 443 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 TRMT1LQ7Z2T5 733 aaKnown RBP5.62□□□□□ -1.51
TDP1-215ENST00000556498 OR2W3Q7Z3T1 314 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 CENPVQ7Z7K6 275 aaPredicted RBP5.62□□□□□ -1.51
TDP1-215ENST00000556498 B3GNT8Q7Z7M8 397 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 RNF130Q86XS8 419 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 CBLN2Q8IUK8 224 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 IGDCC3Q8IVU1 814 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 ADGRF3Q8IZF5 1079 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 GABRG1Q8N1C3 465 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 JAGN1Q8N5M9 183 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 TMEM251Q8N6I4 163 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 DNAJC5GQ8N7S2 189 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 C8orf58Q8NAV2 365 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 FBXO36Q8NEA4 188 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 TMEM163Q8TC26 289 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 GNPDA2Q8TDQ7 276 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 TNFAIP8L1Q8WVP5 186 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 SUSD6Q92537 303 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 MRAP2Q96G30 205 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 ITCHQ96J02 903 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 SDHCQ99643 169 aaPredicted RBP5.62□□□□□ -1.51
TDP1-215ENST00000556498 CGRRF1Q99675 332 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 TLNRD1Q9H1K6 362 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 ANKRA2Q9H9E1 313 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 RAB9BQ9NP90 201 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 ARMCX1Q9P291 453 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 COMMD3Q9UBI1 195 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 NEU3Q9UQ49 428 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 B3GALT5Q9Y2C3 310 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 PTRH2Q9Y3E5 179 aaKnown RBP5.62□□□□□ -1.51
TDP1-215ENST00000556498 TSSC4Q9Y5U2 329 aaPredicted RBP5.62□□□□□ -1.51
TDP1-215ENST00000556498 KPTNQ9Y664 436 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 SCN4AP35499 1836 aa5.62□□□□□ -1.51
TDP1-215ENST00000556498 A0A087WV48 116 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.61□□□□□ -1.51
TDP1-215ENST00000556498 TCRBV3S1A0A5B6 114 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 PRORSD1PA6NEY8 169 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 OR6C6A6NF89 314 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 HMSDA8MTL9 139 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 K7ERI5 159 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 UPK1AO00322 258 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 ACOT8O14734 319 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 GRM6O15303 877 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 UPK3AO75631 287 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 TOX4O94842 621 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 STBD1O95210 358 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 OR6A2O95222 327 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 TMEM50AO95807 157 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 GLP2RO95838 553 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 CFDP00746 253 aaPredicted RBP5.61□□□□□ -1.51
TDP1-215ENST00000556498 IGHG4P01861 327 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 MT-ND4P03905 459 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 FABP3P05413 133 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 FPR1P21462 350 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 OMGP23515 440 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 SLC6A2P23975 617 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 CD40P25942 277 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 ADORA1P30542 326 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 CHRNB4P30926 498 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 SRD5A2P31213 254 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 IL2RGP31785 369 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 RPA3P35244 121 aaPredicted RBP5.61□□□□□ -1.51
TDP1-215ENST00000556498 MVDP53602 400 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 TAS2R41P59536 307 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 TPI1P60174 286 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 ERVPABLB-1P60509 514 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 STXBP1P61764 594 aaKnown RBP5.61□□□□□ -1.51
TDP1-215ENST00000556498 TIMM10P62072 90 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 CDC42EP1Q00587 391 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 NAAAQ02083 359 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 DMWDQ09019 674 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 C2orf80Q0P641 193 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 RAB35Q15286 201 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 EXT1Q16394 746 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 IQCJQ1A5X6 159 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 CTSL3PQ5NE16 218 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 TMEM69Q5SWH9 247 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 C6orf141Q5SZD1 244 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 IDNKQ5T6J7 187 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 ABHD17BQ5VST6 288 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 SLC22A10Q63ZE4 541 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 TMEM42Q69YG0 159 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 NCEH1Q6PIU2 408 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 UNQ6494/PRO21346Q6UXR6 183 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 TMPRSS11AQ6ZMR5 421 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 ZNF367Q7RTV3 350 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 RTN4RL1Q86UN2 441 aaPredicted RBP5.61□□□□□ -1.51
TDP1-215ENST00000556498 AQP12AQ8IXF9 295 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 ZC3H3Q8IXZ2 948 aaKnown RBP5.61□□□□□ -1.51
TDP1-215ENST00000556498 C4orf19Q8IY42 314 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 ZNF664Q8N3J9 261 aa5.61□□□□□ -1.51
TDP1-215ENST00000556498 ZSCAN4Q8NAM6 433 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms