RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 TRIM33Q9UPN9 1127 aa11.75□□□□□ -0.53
ACTN1-219ENST00000556432 MFN2O95140 757 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 OR6A2O95222 327 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 IGHV2-70P01814 119 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 BGLAPP02818 100 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 BPGMP07738 259 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 ADORA3P0DMS8 318 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 MPV17P39210 176 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 THEM4Q5T1C6 240 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 FIP1L1Q6UN15 594 aaKnown RBP11.74□□□□□ -0.53
ACTN1-219ENST00000556432 BTNL3Q6UXE8 466 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 WDR88Q6ZMY6 472 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 RHOUQ7L0Q8 258 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 PXKQ7Z7A4 578 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 ZNF566Q969W8 418 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 SLC41A3Q96GZ6 507 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 MOGAT1Q96PD6 335 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 SLC30A2Q9BRI3 323 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 MARCH7Q9H992 704 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 NANOGQ9H9S0 305 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 PATZ1Q9HBE1 687 aaKnown RBP11.74□□□□□ -0.53
ACTN1-219ENST00000556432 MRPL39Q9NYK5 338 aaKnown RBP11.74□□□□□ -0.53
ACTN1-219ENST00000556432 EIF3KQ9UBQ5 218 aaKnown RBP11.74□□□□□ -0.53
ACTN1-219ENST00000556432 POLR3KQ9Y2Y1 108 aaPredicted RBP11.74□□□□□ -0.53
ACTN1-219ENST00000556432 CMYA5Q8N3K9 4069 aa11.74□□□□□ -0.53
ACTN1-219ENST00000556432 CLPSL1A2RUU4 121 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 LRRN3E7EW58 273 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 PLPP3O14495 311 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 ITM2AO43736 263 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 HTR2AP28223 471 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 SLC6A9P48067 706 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 MMP15P51511 669 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 TNFAIP6P98066 277 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-219ENST00000556432 ZMAT1Q5H9K5 638 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 ULK3Q6PHR2 472 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 C9orf139Q6ZV77 190 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 SLC35D2Q76EJ3 337 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 NUDCD3Q8IVD9 361 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 LRRC18Q8N456 261 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 HIPK4Q8NE63 616 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 OR6S1Q8NH40 331 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 FAM110DQ8TAY7 271 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-219ENST00000556432 TMEM54Q969K7 222 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 SLC35B4Q969S0 331 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 SLC47A1Q96FL8 570 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 NUF2Q9BZD4 464 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 CYSLTR2Q9NS75 346 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 SLC6A13Q9NSD5 602 aa11.73□□□□□ -0.53
ACTN1-219ENST00000556432 THUMPD1Q9NXG2 353 aaKnown RBP11.73□□□□□ -0.53
ACTN1-219ENST00000556432 SLC22A31A6NKX4 558 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 SRRM5B3KS81 715 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 C5orf58C9J3I9 102 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 DHHO43323 396 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 TSPAN15O95858 294 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 NGFP01138 241 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 IL12AP29459 219 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 CD80P33681 288 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 RBMXP38159 391 aaKnown RBP11.72□□□□□ -0.53
ACTN1-219ENST00000556432 MVDP53602 400 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 BTG1P62324 171 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 PAX8Q06710 450 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 MELKQ14680 651 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 TAF9Q16594 264 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 DEFB112Q30KQ8 113 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 SPRNQ5BIV9 151 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 ASPHD2Q6ICH7 369 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 LRFN4Q6PJG9 635 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 UNQ6126/PRO20091Q6UXV3 157 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 BRD3OSQ6XYD6 125 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 LSMEM1Q8N8F7 131 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 OR6X1Q8NH79 312 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 SLC25A40Q8TBP6 338 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 PKNOX2Q96KN3 472 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 SLC19A3Q9BZV2 496 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 KCNN2Q9H2S1 579 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 TPT1P8Q9HAU6 139 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 MSL2Q9HCI7 577 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 TMEM106BQ9NUM4 274 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 C1RLQ9NZP8 487 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 ZDHHC8Q9ULC8 765 aa11.72□□□□□ -0.53
ACTN1-219ENST00000556432 WDR91A4D1P6 747 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 C5orf49A4QMS7 147 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 A8MXK9 166 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 RNF13O43567 381 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 TIMM8AO60220 97 aaPredicted RBP11.71□□□□□ -0.53
ACTN1-219ENST00000556432 NDUFA7O95182 113 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 PLATP00750 562 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 QDPRP09417 244 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 TNFSF4P23510 183 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 STOMP27105 288 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 LIPAP38571 399 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 ZNF84P51523 738 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 CLRN1P58418 232 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 ABCE1P61221 599 aaKnown RBP11.71□□□□□ -0.53
ACTN1-219ENST00000556432 RELBQ01201 579 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 PDCD1Q15116 288 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 ZMYND11Q15326 602 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 TMEM155Q4W5P6 130 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 PABPC1L2AQ5JQF8 200 aa11.71□□□□□ -0.53
ACTN1-219ENST00000556432 FAM91A1Q658Y4 838 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms