RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 GSAPA4D1B5 854 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 EFCAB10A6NFE3 127 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 SYCE1LA8MT33 242 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 PSMD11O00231 422 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 AIM2O14862 343 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 DENRO43583 198 aaKnown RBP3.46□□□□□ -1.86
PRPF39-209ENST00000556353 ZMPSTE24O75844 475 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 SEMA3DO95025 777 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 AKR7A3O95154 331 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 NSA2O95478 260 aaKnown RBP3.46□□□□□ -1.86
PRPF39-209ENST00000556353 TGM6O95932 706 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 CD160O95971 181 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 TRBC1P01850 177 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 GBAP04062 536 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 RAB4AP20338 218 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 HMOX2P30519 316 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 RORAP35398 523 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 SLC26A3P40879 764 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 KLK7P49862 253 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 RAP1GDS1P52306 607 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 PLK1P53350 603 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 KIAA1024LP59773 190 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 UBE2HP62256 183 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 USF2Q15853 346 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-209ENST00000556353 ANKRD20A4Q4UJ75 823 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 CCDC58Q4VC31 144 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 ANKRD20A8PQ5CZ79 823 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 ANKRD20A2Q5SQ80 823 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 ANKRD20A1Q5TYW2 823 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 KCTD16Q68DU8 428 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 ANKRD46Q86W74 232 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 TRIM69Q86WT6 500 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 ERICH1Q86X53 443 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 IQCKQ8N0W5 287 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 DEFB106AQ8N104 65 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 STEAP2Q8NFT2 490 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 OR7G1Q8NGA0 311 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 OR2T34Q8NGX1 318 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 KLK6Q92876 244 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 RASD2Q96D21 266 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 BTN2A3PQ96KV6 586 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 NPY6RQ99463 290 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 SSX3Q99909 188 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 FERMT1Q9BQL6 677 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 FEM1AQ9BSK4 669 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 ZSCAN5AQ9BUG6 496 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 TPPP3Q9BW30 176 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 OR52A5Q9H2C5 316 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 PRORYQ9H606 182 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 METTL8Q9H825 291 aaKnown RBP3.46□□□□□ -1.86
PRPF39-209ENST00000556353 TRIM45Q9H8W5 580 aaPredicted RBP3.46□□□□□ -1.86
PRPF39-209ENST00000556353 POPDC2Q9HBU9 364 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 ARMC1Q9NVT9 282 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 RMND1Q9NWS8 449 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 PEF1Q9UBV8 284 aaKnown RBP3.46□□□□□ -1.86
PRPF39-209ENST00000556353 PLA2G4CQ9UP65 541 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 HS3ST2Q9Y278 367 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 SLC9A8Q9Y2E8 581 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 CCDC168Q8NDH2 2452 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 ESPL1Q14674 2120 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 ZGRF1Q86YA3 2104 aa3.46□□□□□ -1.86
PRPF39-209ENST00000556353 HRNRQ86YZ3 2850 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-209ENST00000556353 POLEQ07864 2286 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 MIF4GDA9UHW6 222 aaKnown RBP3.45□□□□□ -1.86
PRPF39-209ENST00000556353 F5H5T6 163 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 TLR4O00206 839 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 GPR171O14626 319 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 BET1O15155 118 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 SSX5O60225 188 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 HSF2BPO75031 334 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 PSIP1O75475 530 aaKnown RBP3.45□□□□□ -1.86
PRPF39-209ENST00000556353 PDE5AO76074 875 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 RPP14O95059 124 aaKnown RBP3.45□□□□□ -1.86
PRPF39-209ENST00000556353 CCNB2O95067 398 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 AK1P00568 194 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 IL1BP01584 269 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 CAPN1P07384 714 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 ETS1P14921 441 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 HNRNPA2B1P22626 353 aaKnown RBP3.45□□□□□ -1.86
PRPF39-209ENST00000556353 AHCYP23526 432 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 ACP1P24666 158 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 OTX2P32243 289 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 CDH5P33151 784 aaPredicted RBP3.45□□□□□ -1.86
PRPF39-209ENST00000556353 ID1P41134 155 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 FHITP49789 147 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 NPY4RP50391 375 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 AIF1P55008 147 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 MTTPP55157 894 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 SRP54P61011 504 aaKnown RBP3.45□□□□□ -1.86
PRPF39-209ENST00000556353 TNFRSF17Q02223 184 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 NME3Q13232 169 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 PMS2P3Q13401 168 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 ART3Q13508 389 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 IL18Q14116 193 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 CAMK4Q16566 473 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 SGCAQ16586 387 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 CNPY1Q3B7I2 92 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 OR6B2Q6IFH4 312 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 C22orf39Q6P5X5 142 aa3.45□□□□□ -1.86
PRPF39-209ENST00000556353 ZNF730Q6ZMV8 503 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms