RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 PON3Q15166 354 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 SPECC1LQ69YQ0 1117 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 NIPA1Q7RTP0 329 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 NANOGNBQ7Z5D8 188 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 LINC01551Q86U37 167 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 CEP112Q8N8E3 955 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 Q8N976 141 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 SPATA4Q8NEY3 305 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 OR10R2Q8NGX6 335 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 STMN2Q93045 179 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 DNAJC19Q96DA6 116 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 CNDP1Q96KN2 507 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 TSSK3Q96PN8 268 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 LINC00597Q9H2U6 94 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 TPK1Q9H3S4 243 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 PATZ1Q9HBE1 687 aaKnown RBP1.74□□□□□ -2.13
SCFD1-218ENST00000556256 LHX9Q9NQ69 397 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 NMRK1Q9NWW6 199 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 SHPKQ9UHJ6 478 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 CTNNA3Q9UI47 895 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 NUP50Q9UKX7 468 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 TBX21Q9UL17 535 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 RRP15Q9Y3B9 282 aaKnown RBP1.74□□□□□ -2.13
SCFD1-218ENST00000556256 MYO10Q9HD67 2058 aa1.74□□□□□ -2.13
SCFD1-218ENST00000556256 CNTNAP1P78357 1384 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 IGLV4-69A0A075B6H9 119 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 IGLV3-16A0A075B6K0 115 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 HEATR9A2RTY3 570 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 PRSS37A4D1T9 235 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 GOLGA8OA6NCC3 632 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 TRIM64CA6NLI5 447 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 CCDC169A6NNP5 214 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 ANKRD63C9JTQ0 380 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 C11orf94C9JXX5 98 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 GOLGA8NF8WBI6 632 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 TMX2-CTNND1H3BSU7 103 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 DLGAP1O14490 977 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 CLPXO76031 633 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 FGGP02679 453 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 HRH1P35367 487 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 CCNHP51946 323 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-218ENST00000556256 SLC7A9P82251 487 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 HMGN5P82970 282 aaKnown RBP1.73□□□□□ -2.13
SCFD1-218ENST00000556256 SMARCB1Q12824 385 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 TGFBIQ15582 683 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 ZBED5Q49AG3 693 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 VPS26BQ4G0F5 336 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 XKR7Q5GH72 579 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 CCDC183Q5T5S1 534 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 ZNF836Q6ZNA1 936 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 C19orf35Q6ZS72 473 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 PCP2Q8IVA1 136 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 SAXO1Q8IYX7 474 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 PDIK1LQ8N165 341 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 FBXL13Q8NEE6 735 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 CCDC54Q8NEL0 328 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 OR7G2Q8NG99 324 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 OR56B2PQ8NGI1 322 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 ZFP90Q8TF47 636 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 GEMIN6Q8WXD5 167 aaKnown RBP1.73□□□□□ -2.13
SCFD1-218ENST00000556256 ELMO1Q92556 727 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 PIK3IP1Q96FE7 263 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 DUS3LQ96G46 650 aaKnown RBP1.73□□□□□ -2.13
SCFD1-218ENST00000556256 CEP170P1Q96L14 293 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 CCDC77Q9BR77 488 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 CHAC1Q9BUX1 264 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 NUP58Q9BVL2 599 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 FGF20Q9NP95 211 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-218ENST00000556256 CD84Q9UIB8 345 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 LSM7Q9UK45 103 aaKnown RBP1.73□□□□□ -2.13
SCFD1-218ENST00000556256 RABL2BQ9UNT1 228 aa1.73□□□□□ -2.13
SCFD1-218ENST00000556256 FCGBPQ9Y6R7 5405 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-218ENST00000556256 ARHGAP21Q5T5U3 1957 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 MN1Q10571 1320 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-218ENST00000556256 CENPJQ9HC77 1338 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-218ENST00000556256 FAM47DPA6NHR8 397 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 HIDE1A8MVS5 230 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 EEDO75530 441 aaKnown RBP1.72□□□□□ -2.13
SCFD1-218ENST00000556256 PLEKP08567 350 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-218ENST00000556256 TLX1NBP0CAT3 122 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 MAGP20916 626 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 CHMLP26374 656 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 AK4P27144 223 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-218ENST00000556256 CDKN1BP46527 198 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 ACLYP53396 1101 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 HERVK_113P61574 105 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 KCTD19Q17RG1 926 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-218ENST00000556256 ARMC12Q5T9G4 340 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 CERS6Q6ZMG9 384 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 ZFP2Q6ZN57 461 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 TMEM179Q6ZVK1 233 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 STRADAQ7RTN6 431 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 MMAAQ8IVH4 418 aaKnown RBP1.72□□□□□ -2.13
SCFD1-218ENST00000556256 GTPBP8Q8N3Z3 284 aaPredicted RBP1.72□□□□□ -2.13
SCFD1-218ENST00000556256 MREGQ8N565 214 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 OR10G4Q8NGN3 311 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 RHEBL1Q8TAI7 183 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 LKAAEAR1Q8TD35 194 aa1.72□□□□□ -2.13
SCFD1-218ENST00000556256 ACMSDQ8TDX5 336 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms