RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ZNF91Q05481 1191 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 FMODQ06828 376 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 POU4F2Q12837 409 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 GUSBP1Q15486 140 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 KLHL22Q53GT1 634 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 RIPPLY2Q5TAB7 128 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 TMEM211Q6ICI0 200 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 LAIR2Q6ISS4 152 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 SEM1Q6ZVN7 128 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 NUFIP2Q7Z417 695 aaKnown RBP9.76□□□□□ -0.85
TMEM260-208ENST00000555905 ABHD12BQ7Z5M8 362 aaPredicted RBP9.76□□□□□ -0.85
TMEM260-208ENST00000555905 GLB1L2Q8IW92 636 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 UBE2J2Q8N2K1 259 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 POMGNT2Q8NAT1 580 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 ZNF540Q8NDQ6 660 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 OR51L1Q8NGJ5 315 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 OR6K3Q8NGY3 331 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 IPCEF1Q8WWN9 437 aaPredicted RBP9.76□□□□□ -0.85
TMEM260-208ENST00000555905 NSMAFQ92636 917 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 NMD3Q96D46 503 aaKnown RBP9.76□□□□□ -0.85
TMEM260-208ENST00000555905 RNFT2Q96EX2 444 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 LINC00470Q9BZP3 86 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 RACGAP1Q9H0H5 632 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 AMBNQ9NP70 447 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 UPB1Q9UBR1 384 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 FOXD3Q9UJU5 478 aaPredicted RBP9.76□□□□□ -0.85
TMEM260-208ENST00000555905 SPENQ96T58 3664 aaKnown RBP9.76□□□□□ -0.85
TMEM260-208ENST00000555905 PHF3Q92576 2039 aaKnown RBP9.76□□□□□ -0.85
TMEM260-208ENST00000555905 ALPK2Q86TB3 2170 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 IGLV1-36A0A0B4J1U3 117 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 TRGV8A0A0C4DH27 118 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 CCDC182A6NF36 153 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 HSPB2A8KAH6 182 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 FAM171A2A8MVW0 826 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 ZNF587BE7ETH6 402 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 PTGES3LE9PB15 166 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 E9PLN8 166 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 DCTN6O00399 190 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 UPK3AO75631 287 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 EEF1B2P24534 225 aaKnown RBP9.75□□□□□ -0.85
TMEM260-208ENST00000555905 GSTT1P30711 240 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 CEACAM8P31997 349 aaPredicted RBP9.75□□□□□ -0.85
TMEM260-208ENST00000555905 CA7P43166 264 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 KIR2DL2P43627 348 aaPredicted RBP9.75□□□□□ -0.85
TMEM260-208ENST00000555905 OR3A2P47893 321 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 ZNF133P52736 654 aaPredicted RBP9.75□□□□□ -0.85
TMEM260-208ENST00000555905 PMPCAQ10713 525 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 RAB40BQ12829 278 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 GGTLC2Q14390 218 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 HSPB2Q16082 182 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 KCTD21Q4G0X4 260 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 C10orf128Q5T292 105 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 TSPO2Q5TGU0 170 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 LRFN4Q6PJG9 635 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 SLC25A47Q6Q0C1 308 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 RPRMLQ8N4K4 120 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 MYDGFQ969H8 173 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 ZMYND19Q96E35 227 aaPredicted RBP9.75□□□□□ -0.85
TMEM260-208ENST00000555905 VKORC1Q9BQB6 163 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 SFXN3Q9BWM7 321 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 RBM24Q9BX46 236 aaKnown RBP9.75□□□□□ -0.85
TMEM260-208ENST00000555905 CCNB1IP1Q9NPC3 277 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 HAO2Q9NYQ3 351 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 CNOT2Q9NZN8 540 aaKnown RBP9.75□□□□□ -0.85
TMEM260-208ENST00000555905 PSORS1C1Q9UIG5 152 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 OSGIN2Q9Y236 505 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 COA3Q9Y2R0 106 aaPredicted RBP9.75□□□□□ -0.85
TMEM260-208ENST00000555905 PCDHGB1Q9Y5G3 927 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 IGSF10Q6WRI0 2623 aa9.75□□□□□ -0.85
TMEM260-208ENST00000555905 A0A1W2PPL8 197 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 DHHO43323 396 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 TOXO94900 526 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 FADS2O95864 444 aaKnown RBP9.74□□□□□ -0.85
TMEM260-208ENST00000555905 IGHV3-9P01782 118 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 RPSAP08865 295 aaKnown RBP9.74□□□□□ -0.85
TMEM260-208ENST00000555905 PIPP12273 146 aaPredicted RBP9.74□□□□□ -0.85
TMEM260-208ENST00000555905 ZNF823P16415 610 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 CTSSP25774 331 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 LAP3P28838 519 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 OPRM1P35372 400 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 SLC15A1P46059 708 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 GABARAPL2P60520 117 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 ROR2Q01974 943 aaKnown RBP9.74□□□□□ -0.85
TMEM260-208ENST00000555905 DBPQ10586 325 aaPredicted RBP9.74□□□□□ -0.85
TMEM260-208ENST00000555905 FOXF2Q12947 444 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 ETFDHQ16134 617 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 PHYHD1Q5SRE7 291 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 FBXW9Q5XUX1 488 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 B3GLCTQ6Y288 498 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 AHSA2Q719I0 299 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.74□□□□□ -0.85
TMEM260-208ENST00000555905 STX19Q8N4C7 294 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 GALNT11Q8NCW6 608 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 OR51G2Q8NGK0 314 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 GGHQ92820 318 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 KISS1RQ969F8 398 aaPredicted RBP9.74□□□□□ -0.85
TMEM260-208ENST00000555905 ALKBH3Q96Q83 286 aaPredicted RBP9.74□□□□□ -0.85
TMEM260-208ENST00000555905 CNN2Q99439 309 aaKnown RBP9.74□□□□□ -0.85
TMEM260-208ENST00000555905 COPS4Q9BT78 406 aa9.74□□□□□ -0.85
TMEM260-208ENST00000555905 SEC61A2Q9H9S3 476 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms