RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 GPX7Q96SL4 187 aaPredicted RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 SECISBP2Q96T21 854 aaKnown RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 TEAD3Q99594 435 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 SSBP4Q9BWG4 385 aaPredicted RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 TAPBPLQ9BX59 468 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 RTN4RQ9BZR6 473 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 NRIP3Q9NQ35 241 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 HAO2Q9NYQ3 351 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 PPP4R1LQ9P1A2 415 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 ASH2LQ9UBL3 628 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 SEC14L4Q9UDX3 406 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 CHRNA9Q9UGM1 479 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 CLEC2DQ9UHP7 191 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 SSR3Q9UNL2 185 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 FARSAQ9Y285 508 aaKnown RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 YARS2Q9Y2Z4 477 aaKnown RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 LSM2Q9Y333 95 aaKnown RBP6.13□□□□□ -1.43
SLIRP-204ENST00000555890 IER3IP1Q9Y5U9 82 aa6.13□□□□□ -1.43
SLIRP-204ENST00000555890 IGLV3-32A0A0A0MS00 114 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 LOC100506127A0A0U1RQW1 187 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 A0A1W2PQ72 361 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 DAPL1A0PJW8 107 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 MCIDASD6RGH6 385 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 LRRN3E7EW58 273 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 AKAP8O43823 692 aaKnown RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 ITGA10O75578 1167 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 APOL3O95236 402 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 AHSA1O95433 338 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 RENP00797 406 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 BGLAPP02818 100 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 CD14P08571 375 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 ADRA2AP08913 450 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 ASAH2BP0C7U1 165 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 HIST1H1CP16403 213 aaKnown RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 PRKCAP17252 672 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 MST1P26927 711 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 OTX2P32243 289 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 AQP2P41181 271 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 RPS5P46782 204 aaKnown RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 MEOX1P50221 254 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 SSR4P51571 173 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 CTXN1P60606 82 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 NCS1P62166 190 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 RPS4XP62701 263 aaKnown RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 ERVK-25P63136 954 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 EGR4Q05215 589 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 SNTA1Q13424 505 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 AQP6Q13520 282 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 TPBGQ13641 420 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 CRMP1Q14194 572 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 CNN3Q15417 329 aaKnown RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 TOMM34Q15785 309 aaPredicted RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 NTRK2Q16620 822 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF791Q3KP31 576 aaPredicted RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 SLC35D3Q5M8T2 416 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF362Q5T0B9 420 aaPredicted RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 FAM69AQ5T7M9 428 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 C1orf140Q5VVS0 124 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 FCRLBQ6BAA4 426 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 SHFQ7M4L6 423 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 LHFPL3Q86UP9 236 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 IGFN1Q86VF2 1251 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 RPS19BP1Q86WX3 136 aaKnown RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 ADGRG3Q86Y34 549 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 OR2C3Q8N628 320 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 AMER2Q8N7J2 671 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 POMGNT2Q8NAT1 580 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 BBS1Q8NFJ9 593 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 OR10H4Q8NGA5 316 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 OR4F15Q8NGB8 312 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 OR11G2Q8NGC1 345 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 OR51G2Q8NGK0 314 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 OR4K13Q8NH42 304 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 OR52N1Q8NH53 320 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 MOSPD2Q8NHP6 518 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 TBC1D15Q8TC07 691 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 CT55Q8WUE5 264 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 RNF138Q8WVD3 245 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 UFD1Q92890 307 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 PTP4A1Q93096 173 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 TAAR8Q969N4 342 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 SLC25A36Q96CQ1 311 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 FOXRED1Q96CU9 486 aaPredicted RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 DDIT4LQ96D03 193 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 MRPL48Q96GC5 212 aaKnown RBP6.12□□□□□ -1.43
SLIRP-204ENST00000555890 MOGAT1Q96PD6 335 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 OPALINQ96PE5 141 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 FOXC2Q99958 501 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 MESP1Q9BRJ9 268 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 CHCHD6Q9BRQ6 235 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 KATNB1Q9BVA0 655 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 GPR87Q9BY21 358 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 B3GNT4Q9C0J1 378 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 DCSTAMPQ9H295 470 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 OR51V1Q9H2C8 321 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 PTGES2Q9H7Z7 377 aa6.12□□□□□ -1.43
SLIRP-204ENST00000555890 MED20Q9H944 212 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms