RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 MUS81Q96NY9 551 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 IL4I1Q96RQ9 567 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 USB1Q9BQ65 265 aaKnown RBP10.99□□□□□ -0.65
SHMT2-221ENST00000555773 RBM24Q9BX46 236 aaKnown RBP10.99□□□□□ -0.65
SHMT2-221ENST00000555773 RACGAP1Q9H0H5 632 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 Q9H521 79 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 SRA1Q9HD15 236 aaKnown RBP10.99□□□□□ -0.65
SHMT2-221ENST00000555773 RPRD1BQ9NQG5 326 aaKnown RBP10.99□□□□□ -0.65
SHMT2-221ENST00000555773 MED12LQ86YW9 2145 aa10.99□□□□□ -0.65
SHMT2-221ENST00000555773 SNTNA6NMZ2 147 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF99A8MXY4 864 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-221ENST00000555773 EEF1E1-BLOC1S5C9J1V9 151 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 H7C1C5 153 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 J3QKU1 62 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 EEF1E1O43324 174 aaKnown RBP10.98□□□□□ -0.65
SHMT2-221ENST00000555773 PLA2G2AP14555 144 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 HOXB1P14653 301 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-221ENST00000555773 CTLA4P16410 223 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 NPR2P20594 1047 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 LCN6P62502 163 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 OCLNQ16625 522 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 FBXL19-AS1Q494R0 122 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 NRN1LQ496H8 165 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 SLC35D3Q5M8T2 416 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 AADACL4Q5VUY2 407 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 NXNL2Q5VZ03 156 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 PLBD1Q6P4A8 553 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF627Q7L945 461 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 LUZP2Q86TE4 346 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 GLB1L2Q8IW92 636 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 ENTHD1Q8IYW4 607 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 C8orf59Q8N0T1 100 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-221ENST00000555773 RELL2Q8NC24 303 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-221ENST00000555773 RFKQ969G6 155 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 UBE2FQ969M7 185 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 BOD1Q96IK1 185 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 DOCK7Q96N67 2140 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 KCNJ16Q9NPI9 418 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 HINT3Q9NQE9 182 aaKnown RBP10.98□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF226Q9NYT6 803 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 TAS2R16Q9NYV7 291 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 GPR52Q9Y2T5 361 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 PCNX1Q96RV3 2341 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 HIVEP3Q5T1R4 2406 aa10.98□□□□□ -0.65
SHMT2-221ENST00000555773 PHF3Q92576 2039 aaKnown RBP10.97□□□□□ -0.65
SHMT2-221ENST00000555773 MYO18BQ8IUG5 2567 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 IGLV1-36A0A0B4J1U3 117 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 WIPF3A6NGB9 483 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 FAM183AA6NL82 134 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 PRODHO43272 600 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 ZG16O60844 167 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 SPI1P17947 270 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 GABRB1P18505 474 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 PSMB1P20618 241 aaKnown RBP10.97□□□□□ -0.65
SHMT2-221ENST00000555773 COX5AP20674 150 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 IGHV1-2P23083 117 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 LAP3P28838 519 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 CD79BP40259 229 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 ASCL1P50553 236 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 ISL1P61371 349 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 MRPS34P82930 218 aaKnown RBP10.97□□□□□ -0.65
SHMT2-221ENST00000555773 IL5RAQ01344 420 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 TEKQ02763 1124 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 GLO1Q04760 184 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 FMODQ06828 376 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 TMED1Q13445 227 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 CEACAM16Q2WEN9 425 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 SFRP5Q5T4F7 317 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 C1QTNF12Q5T7M4 302 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 OR7E24Q6IFN5 339 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 FOXL2NBQ6ZUU3 175 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 MEPCEQ7L2J0 689 aaKnown RBP10.97□□□□□ -0.65
SHMT2-221ENST00000555773 LINGO2Q7L985 606 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 THAP5Q7Z6K1 395 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 GID4Q8IVV7 300 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 CCDC36Q8IYA8 594 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 ZNF433Q8N7K0 673 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-221ENST00000555773 C1orf162Q8NEQ5 155 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-221ENST00000555773 PROKR2Q8NFJ6 384 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 ITLN2Q8WWU7 325 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-221ENST00000555773 NSMAFQ92636 917 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 OTULINQ96BN8 352 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 TSSK2Q96PF2 358 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 ALKBH3Q96Q83 286 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-221ENST00000555773 FOXB1Q99853 325 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 ANKRD60Q9BZ19 345 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 OR10A4Q9H209 315 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 OR51V1Q9H2C8 321 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 RERGLQ9H628 205 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 SIAEQ9HAT2 523 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 CLN6Q9NWW5 311 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 COA3Q9Y2R0 106 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-221ENST00000555773 KIAA1549Q9HCM3 1950 aa10.97□□□□□ -0.65
SHMT2-221ENST00000555773 IGKV1D-43A0A0B4J1Z2 117 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 CIB4A0PJX0 185 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 SH3D21A4FU49 640 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 SLC22A31A6NKX4 558 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 DCTN6O00399 190 aa10.96□□□□□ -0.65
SHMT2-221ENST00000555773 DENRO43583 198 aaKnown RBP10.96□□□□□ -0.65
SHMT2-221ENST00000555773 GLCEO94923 617 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms