RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 IPCEF1Q8WWN9 437 aaPredicted RBP9.06□□□□□ -0.96
NEK9-205ENST00000555405 MCHR2Q969V1 340 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 CNN2Q99439 309 aaKnown RBP9.06□□□□□ -0.96
NEK9-205ENST00000555405 SLC25A18Q9H1K4 315 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 DUSP21Q9H596 190 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 CRLF2Q9HC73 371 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 CCNB1IP1Q9NPC3 277 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 KLHL9Q9P2J3 617 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 TINAGQ9UJW2 476 aa9.06□□□□□ -0.96
NEK9-205ENST00000555405 A0A1W2PR80 420 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 VAMP5O95183 116 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 RPL5P46777 297 aaKnown RBP9.05□□□□□ -0.96
NEK9-205ENST00000555405 GALK2Q01415 458 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 TSC22D1Q15714 1073 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 ANKDD1AQ495B1 522 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 PHYHD1Q5SRE7 291 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 SLC35F2Q8IXU6 374 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 SVOPQ8N4V2 548 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 CNTNAP3BQ96NU0 1288 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 YTHDF1Q9BYJ9 559 aaKnown RBP9.05□□□□□ -0.96
NEK9-205ENST00000555405 CNTNAP3Q9BZ76 1288 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 ISG20L2Q9H9L3 353 aaKnown RBP9.05□□□□□ -0.96
NEK9-205ENST00000555405 KCNG2Q9UJ96 466 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 GRIP1Q9Y3R0 1128 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 TRGV8A0A0C4DH27 118 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 A0A1W2PQL4 384 aaPredicted RBP9.05□□□□□ -0.96
NEK9-205ENST00000555405 KHDRBS3O75525 346 aaKnown RBP9.05□□□□□ -0.96
NEK9-205ENST00000555405 GLCEO94923 617 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 OR8G3PP0DMU2 310 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 DCKP27707 260 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 P2RY4P51582 365 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 PRKXP51817 358 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 GTF2A1P52655 376 aaPredicted RBP9.05□□□□□ -0.96
NEK9-205ENST00000555405 NR1H2P55055 460 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 FOXG1P55316 489 aaPredicted RBP9.05□□□□□ -0.96
NEK9-205ENST00000555405 OR12D2P58182 307 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 GLO1Q04760 184 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 TSPO2Q5TGU0 170 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 FAR1Q8WVX9 515 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 SPRYD4Q8WW59 207 aaPredicted RBP9.05□□□□□ -0.96
NEK9-205ENST00000555405 ADGRG7Q96K78 797 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 C1QTNF6Q9BXI9 259 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 NAA50Q9GZZ1 169 aaKnown RBP9.05□□□□□ -0.96
NEK9-205ENST00000555405 QPCTLQ9NXS2 382 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 GLTPQ9NZD2 209 aa9.05□□□□□ -0.96
NEK9-205ENST00000555405 LINC01387J3KSC0 135 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 SLC43A1O75387 559 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 B4GALT1P15291 398 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 CRABP1P29762 137 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 CSNK2BP67870 215 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 H3F3AP84243 136 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 SLC3A1Q07837 685 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 TAF13Q15543 124 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 TSTQ16762 297 aaKnown RBP9.04□□□□□ -0.96
NEK9-205ENST00000555405 TIGD6Q17RP2 521 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 CEACAM16Q2WEN9 425 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 GFOD2Q3B7J2 385 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 ARMCX4Q5H9R4 360 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 LCN1P1Q5VSP4 162 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 LIPKQ5VXJ0 399 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 LRFN4Q6PJG9 635 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 LRRN1Q6UXK5 716 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 SSX6Q7RTT6 188 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 PRSS48Q7RTY5 328 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 ZIC4Q8N9L1 334 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 Q8NA96 180 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 ZNF519Q8TB69 540 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 PNPLA2Q96AD5 504 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 INTS14Q96SY0 518 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 SH3GL3Q99963 347 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 ALG8Q9BVK2 526 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 COPS3Q9UNS2 423 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 AHCYL1O43865 530 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 TFP02787 698 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 CELP19835 753 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 CCNOP22674 350 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 TUBA1BP68363 451 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 TUBA4AP68366 448 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 ZP4Q12836 540 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 RAB39AQ14964 217 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 ST3GAL2Q16842 350 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 DNM1P34Q6PK57 102 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 ARL9Q6T311 187 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 TUBA1AQ71U36 451 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 LUZP2Q86TE4 346 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 ADCK1Q86TW2 530 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 YIPF7Q8N8F6 280 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 NMD3Q96D46 503 aaKnown RBP9.04□□□□□ -0.96
NEK9-205ENST00000555405 GPX7Q96SL4 187 aaPredicted RBP9.04□□□□□ -0.96
NEK9-205ENST00000555405 RACGAP1Q9H0H5 632 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 ACOT13Q9NPJ3 140 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 MRPS18CQ9Y3D5 142 aaKnown RBP9.04□□□□□ -0.96
NEK9-205ENST00000555405 PCDHGB7Q9Y5F8 929 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 ITPR1Q14643 2758 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 RELNP78509 3460 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 A0A1W2PPK0 400 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 SMIM30A4D0T7 59 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 ZNF99A8MXY4 864 aaPredicted RBP9.04□□□□□ -0.96
NEK9-205ENST00000555405 PRRG2O14669 202 aa9.04□□□□□ -0.96
NEK9-205ENST00000555405 AKAP8O43823 692 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms