RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 SLC37A3Q8NCC5 494 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 OR1K1Q8NGR3 316 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 ZNF837Q96EG3 531 aaPredicted RBP12.55□□□□□ -0.4
CHD8-208ENST00000555301 FOXB1Q99853 325 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 ACTR6Q9GZN1 396 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 NUAK2Q9H093 628 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 VCX3BQ9H321 246 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 TOR3AQ9H497 397 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 SLC24A3Q9HC58 644 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 TVP23BQ9NYZ1 205 aa12.55□□□□□ -0.4
CHD8-208ENST00000555301 IGKV1D-43A0A0B4J1Z2 117 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 OR6C68A6NDL8 312 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 TUBAL3A6NHL2 446 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 OR5H1A6NKK0 313 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 KHDRBS3O75525 346 aaKnown RBP12.54□□□□□ -0.4
CHD8-208ENST00000555301 SNAP29O95721 258 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 CLDN1O95832 211 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 CTLA4P16410 223 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 NPR2P20594 1047 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 PAICSP22234 425 aaKnown RBP12.54□□□□□ -0.4
CHD8-208ENST00000555301 EPHA2P29317 976 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 CCKARP32238 428 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 POLR2IP36954 125 aaKnown RBP12.54□□□□□ -0.4
CHD8-208ENST00000555301 CRMP1Q14194 572 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 TSC22D1Q15714 1073 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 SNAPC1Q16533 368 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 ZIK1Q3SY52 487 aaPredicted RBP12.54□□□□□ -0.4
CHD8-208ENST00000555301 TIMM23BQ5SRD1 257 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 C12orf73Q69YU5 71 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 ZNF813Q6ZN06 617 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 CCDC36Q8IYA8 594 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 OR2T4Q8NH00 348 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 HSD17B8Q92506 261 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 NSMAFQ92636 917 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 S100PBPQ96BU1 408 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 DDOQ99489 341 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 GRIP2Q9C0E4 1043 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 RPRD1BQ9NQG5 326 aaKnown RBP12.54□□□□□ -0.4
CHD8-208ENST00000555301 FKBP7Q9Y680 259 aa12.54□□□□□ -0.4
CHD8-208ENST00000555301 A1L4Q6 167 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 PRR23D1E9PI22 279 aaPredicted RBP12.53□□□□□ -0.4
CHD8-208ENST00000555301 C19orf84I3L1E1 186 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 FARS2O95363 451 aaKnown RBP12.53□□□□□ -0.4
CHD8-208ENST00000555301 PRR23D2P0DMB1 279 aaPredicted RBP12.53□□□□□ -0.4
CHD8-208ENST00000555301 IGFBP2P18065 325 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 PAX7P23759 505 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 SLC25A1P53007 311 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 CDC42P60953 191 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 UBE2NP61088 152 aaKnown RBP12.53□□□□□ -0.4
CHD8-208ENST00000555301 MRPS34P82930 218 aaKnown RBP12.53□□□□□ -0.4
CHD8-208ENST00000555301 TBRG1Q3YBR2 411 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 KLHL24Q6TFL4 600 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 ZBTB46Q86UZ6 589 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 OR6V1Q8N148 313 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 CYB561A3Q8NBI2 242 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 ZNF555Q8NEP9 628 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 BCL2L2Q92843 193 aaPredicted RBP12.53□□□□□ -0.4
CHD8-208ENST00000555301 MUCL1Q96DR8 90 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 HRASLS5Q96KN8 279 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 DACH2Q96NX9 599 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 PSMG3-AS1Q96PY0 264 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 MBOAT4Q96T53 435 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 MED18Q9BUE0 208 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 RACGAP1Q9H0H5 632 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 FN3KQ9H479 309 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 RERGLQ9H628 205 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 SIAEQ9HAT2 523 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 SRA1Q9HD15 236 aaKnown RBP12.53□□□□□ -0.4
CHD8-208ENST00000555301 OBP2BQ9NPH6 170 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 SLC17A5Q9NRA2 495 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 TMEM38BQ9NVV0 291 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 B9D1Q9UPM9 204 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 AMDHD2Q9Y303 409 aa12.53□□□□□ -0.4
CHD8-208ENST00000555301 A0A096LPE4 126 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 IGLV1-36A0A0B4J1U3 117 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 A0A1W2PPZ6 126 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 OR8G3PP0DMU2 310 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 B4GALT1P15291 398 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 LAP3P28838 519 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 KIR2DL3P43628 341 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 CENPAP49450 140 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 GLO1Q04760 184 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 HIKESHIQ53FT3 197 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 FOXL2NBQ6ZUU3 175 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 GLB1L2Q8IW92 636 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 DMRTC2Q8IXT2 367 aaPredicted RBP12.52□□□□□ -0.41
CHD8-208ENST00000555301 SLC22A24Q8N4F4 322 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 NRG4Q8WWG1 115 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 TRUB1Q8WWH5 349 aaKnown RBP12.52□□□□□ -0.41
CHD8-208ENST00000555301 NANOS1Q8WY41 292 aaKnown RBP12.52□□□□□ -0.41
CHD8-208ENST00000555301 TSSK2Q96PF2 358 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 SPOCK3Q9BQ16 436 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 NMNAT2Q9BZQ4 307 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 SEC61A2Q9H9S3 476 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 MOV10Q9HCE1 1003 aaKnown RBP12.52□□□□□ -0.41
CHD8-208ENST00000555301 FAM118AQ9NWS6 357 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 COA3Q9Y2R0 106 aaPredicted RBP12.52□□□□□ -0.41
CHD8-208ENST00000555301 UGT2A1Q9Y4X1 527 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 GMPPBQ9Y5P6 360 aa12.52□□□□□ -0.41
CHD8-208ENST00000555301 DOPEY1Q5JWR5 2465 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms