RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SLC2A5P22732 501 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 IL32P24001 234 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 SLC6A6P31641 620 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 CDKN2AP42771 156 aaKnown RBP9.63□□□□□ -0.87
SHMT2-218ENST00000555213 ALDH3B2P48448 385 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 NUDT6P53370 316 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 BIDP55957 195 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 GABARAPL2P60520 117 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 ERVK-25P63136 954 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 TGFBR3Q03167 851 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 TFF3Q07654 80 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 ITGADQ13349 1161 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 XAF1Q6GPH4 301 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 ZNF474Q6S9Z5 364 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-218ENST00000555213 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.63□□□□□ -0.87
SHMT2-218ENST00000555213 MED12LQ86YW9 2145 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 CPOQ8IVL8 374 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 SPARTQ8N0X7 666 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 GPR137CQ8N3F9 429 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 NPEPL1Q8NDH3 523 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 BBS1Q8NFJ9 593 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 OR52L1Q8NGH7 329 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 OR6N1Q8NGY5 312 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 OR6X1Q8NH79 312 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 ZNRF4Q8WWF5 429 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 KISS1RQ969F8 398 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-218ENST00000555213 LRR1Q96L50 414 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 ERMAPQ96PL5 475 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-218ENST00000555213 USB1Q9BQ65 265 aaKnown RBP9.63□□□□□ -0.87
SHMT2-218ENST00000555213 HDHD5Q9BXW7 423 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 NPDC1Q9NQX5 325 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-218ENST00000555213 CMC2Q9NRP2 79 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 IMPAD1Q9NX62 359 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 MED29Q9NX70 200 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 DNAJC27Q9NZQ0 273 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 PLEKHB1Q9UF11 243 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-218ENST00000555213 PRSS50Q9UI38 385 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 ZNF346Q9UL40 294 aaKnown RBP9.63□□□□□ -0.87
SHMT2-218ENST00000555213 BAIAP2Q9UQB8 552 aa9.63□□□□□ -0.87
SHMT2-218ENST00000555213 SLC35F4A4IF30 521 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 DPPA5A6NC42 116 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 TUBAL3A6NHL2 446 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 A6NIZ1 184 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 FAM183AA6NL82 134 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 IDH3BO43837 385 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 F13BP05160 661 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 CD14P08571 375 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 HLA-DOBP13765 273 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 APEHP13798 732 aaKnown RBP9.62□□□□□ -0.87
SHMT2-218ENST00000555213 PPP3CBP16298 524 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 HIST1H1CP16403 213 aaKnown RBP9.62□□□□□ -0.87
SHMT2-218ENST00000555213 JUNBP17275 347 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-218ENST00000555213 NOS3P29474 1203 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 C21orf33P30042 268 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-218ENST00000555213 HOXC12P31275 282 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 UGT2B10P36537 528 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 CSNK1A1P48729 337 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 SELENOPP49908 381 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 SH3BGRP55822 239 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-218ENST00000555213 CLRN1P58418 232 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 CTXN1P60606 82 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 RAP1BP61224 184 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 RAP1AP62834 184 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 TUBA4AP68366 448 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 FAPQ12884 760 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 DOC2BQ14184 412 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 IRF3Q14653 427 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 ACKR1Q16570 336 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 MEDAGQ5VYS4 303 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 CARD17Q5XLA6 110 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 ZNF773Q6PK81 442 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 MEX3BQ6ZN04 569 aaKnown RBP9.62□□□□□ -0.87
SHMT2-218ENST00000555213 CXorf67Q86X51 503 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-218ENST00000555213 TMEM123Q8N131 208 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 GABRG1Q8N1C3 465 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 SLC37A3Q8NCC5 494 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 STEAP2Q8NFT2 490 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 TMIGD2Q96BF3 282 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 Q96M85 177 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 ALKBH3Q96Q83 286 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-218ENST00000555213 TSPAN32Q96QS1 320 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 OR2M2Q96R28 347 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 KATNB1Q9BVA0 655 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 MRPS26Q9BYN8 205 aaKnown RBP9.62□□□□□ -0.87
SHMT2-218ENST00000555213 LINC00470Q9BZP3 86 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 NMNAT2Q9BZQ4 307 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 OR10A4Q9H209 315 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 TXNIPQ9H3M7 391 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 MED20Q9H944 212 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 CLN6Q9NWW5 311 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 TAS2R16Q9NYV7 291 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 GRHPRQ9UBQ7 328 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 NDRG3Q9UGV2 375 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 SCOCQ9UIL1 159 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 PCDHGB1Q9Y5G3 927 aa9.62□□□□□ -0.87
SHMT2-218ENST00000555213 INTS1Q8N201 2190 aaKnown RBP9.62□□□□□ -0.87
SHMT2-218ENST00000555213 USP9YO00507 2555 aaPredicted RBP9.62□□□□□ -0.87
SHMT2-218ENST00000555213 ALPK2Q86TB3 2170 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 A0A087WXM4 84 aa9.61□□□□□ -0.87
SHMT2-218ENST00000555213 CIB4A0PJX0 185 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms