RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 EXD2Q9NVH0 621 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 ATAD3AQ9NVI7 634 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 SLCO1C1Q9NYB5 712 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 TAAR3PQ9P1P4 343 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 MYEF2Q9P2K5 600 aaKnown RBP4.07□□□□□ -1.76
ATXN3-229ENST00000554672 SLC23A1Q9UHI7 598 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 LEF1Q9UJU2 399 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-229ENST00000554672 PURGQ9UJV8 347 aaKnown RBP4.07□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF180Q9UJW8 692 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 FBXL3Q9UKT7 428 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 RCE1Q9Y256 329 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 TMED5Q9Y3A6 229 aa4.07□□□□□ -1.76
ATXN3-229ENST00000554672 CFAP73A6NFT4 308 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 A8MVM7 634 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF99A8MXY4 864 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 TMEM114B3SHH9 223 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 POC1B-GALNT4F8VUJ3 575 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 TRAPPC2LH3BP13 241 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 CFLARO15519 480 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 TPD52L2O43399 206 aaKnown RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 BCAS1O75363 584 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 SLC43A1O75387 559 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 LYPLA1O75608 230 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 RAB36O95755 333 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 GPANK1O95872 356 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 C6orf47O95873 294 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 HLA-HP01893 362 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 MT-ND5P03915 603 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 CHRM4P08173 479 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 SNRPAP09012 282 aaKnown RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 TFPTP0C1Z6 253 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 PPIAL4GP0DN37 164 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 CD79AP11912 226 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 NEFHP12036 1026 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF12P17014 697 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF14P17017 642 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF43P17038 809 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 P2RY4P51582 365 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 RAG2P55895 527 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 CLDN17P56750 224 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 LOXL3P58215 753 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 RAB1AP62820 205 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 PAX8Q06710 450 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 PIGFQ07326 219 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 C1DQ13901 141 aaKnown RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 CEACAM16Q2WEN9 425 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 KPRPQ5T749 579 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 ATAD3BQ5T9A4 648 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 TYW3Q6IPR3 259 aaKnown RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 RGS7BPQ6MZT1 257 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 RNF165Q6ZSG1 346 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 OLIG3Q7RTU3 272 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 C16orf62Q7Z3J2 963 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 PQLC1Q8N2U9 271 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 SPATA4Q8NEY3 305 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 OR7A2PQ8NGA2 310 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 OR52E2Q8NGJ4 325 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 FAM110DQ8TAY7 271 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 SYNPRQ8TBG9 265 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 XAGE5Q8WWM1 108 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 C11orf40Q8WZ69 217 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 CCL17Q92583 94 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 CNOT9Q92600 299 aaKnown RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 COQ8BQ96D53 544 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 TRIM44Q96DX7 344 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 ELMOD3Q96FG2 381 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 PAFAH2Q99487 392 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 RAB17Q9H0T7 212 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 ADPRHL2Q9NX46 363 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 UBAP1Q9NZ09 502 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 NINJ2Q9NZG7 142 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 FAM30AQ9NZY2 134 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 SLC7A8Q9UHI5 535 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 KLHL21Q9UJP4 597 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 FZR1Q9UM11 496 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 WDR45Q9Y484 360 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 INSIG2Q9Y5U4 225 aa4.06□□□□□ -1.76
ATXN3-229ENST00000554672 KMT2CQ8NEZ4 4911 aaKnown RBP4.06□□□□□ -1.76
ATXN3-229ENST00000554672 WNK1Q9H4A3 2382 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 IGLV3-9A0A075B6K5 115 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 A0A096LPI6 279 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 LOC102725191A0A1B0GVB3 256 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 ISPDA4D126 451 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 C5orf63A6NC05 138 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 CLDN24A6NM45 220 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 SRRM5B3KS81 715 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 AP3D1O14617 1153 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 AZIN1O14977 448 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 ERLIN1O75477 346 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 CLPXO76031 633 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 SEC14L2O76054 403 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 ZFPL1O95159 310 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 UBL3O95164 117 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 CLPTM1O96005 669 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 CHEK2O96017 543 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 IGHMP01871 453 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 SERPINA5P05154 406 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 LINC00032P0C843 101 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 OR12D1P0DN82 309 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF250P15622 560 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms