RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 CMTM3Q96MX0 182 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 VPS29Q9UBQ0 182 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 CAMTA1Q9Y6Y1 1673 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 HRO43593 1189 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 MSCO60682 206 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 ADAM11O75078 769 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 RAP2AP10114 183 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 RUNX3Q13761 415 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 CLLU1OSQ5K130 101 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 FAM198BQ6UWH4 519 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 DBX2Q6ZNG2 339 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 THNSL2Q86YJ6 484 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 GTPBP8Q8N3Z3 284 aaPredicted RBP3.05□□□□□ -1.92
SYNE2-212ENST00000554584 C15orf40Q8WUR7 153 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF419Q96HQ0 510 aaPredicted RBP3.05□□□□□ -1.92
SYNE2-212ENST00000554584 NPFFR1Q9GZQ6 430 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 MRPS18BQ9Y676 258 aaKnown RBP3.05□□□□□ -1.92
SYNE2-212ENST00000554584 IQCF3P0C7M6 154 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 F2RL1P55085 397 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 FOXO1Q12778 655 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 HAGHQ16775 308 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 GLYR1Q49A26 553 aaPredicted RBP3.05□□□□□ -1.92
SYNE2-212ENST00000554584 PXDC1Q5TGL8 231 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 SLC35E4Q6ICL7 350 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 CORO6Q6QEF8 472 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 SLC24A4Q8NFF2 622 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 AKR7LQ8NHP1 331 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF251Q9BRH9 671 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 CLMPQ9H6B4 373 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 RPF2Q9H7B2 306 aaKnown RBP3.05□□□□□ -1.92
SYNE2-212ENST00000554584 OR6C2Q9NZP2 312 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 DNAJC25-GNG10A0A024R161 153 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 IGHV3OR16-8A0A075B7F1 116 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 C2CD4DB7Z1M9 353 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 ARPC5O15511 151 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 RORAP35398 523 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 IER2Q9BTL4 223 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 APMAPQ9HDC9 416 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 EBF1Q9UH73 591 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 TECTAO75443 2155 aa3.05□□□□□ -1.92
SYNE2-212ENST00000554584 MBD5Q9P267 1494 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MEIKINA0A087WXM9 373 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR5K3A6NET4 321 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 UBE2MP61081 183 aaKnown RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SYT6Q5T7P8 510 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TSEN54Q7Z6J9 526 aaKnown RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 LRRTM1Q86UE6 522 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 NAA40Q86UY6 237 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RTP4Q96DX8 246 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SLC35E1Q96K37 410 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TECRQ9NZ01 308 aaKnown RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 UGT2A1Q9Y4X1 527 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 AMTP48728 403 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RAB15P59190 212 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 NXNL2Q5VZ03 156 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 GNPDA2Q8TDQ7 276 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OR11A1Q9GZK7 315 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SFXN1Q9H9B4 322 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SIX2Q9NPC8 291 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 EHFQ9NZC4 300 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 OSGIN1Q9UJX0 560 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 FRMPD1Q5SYB0 1578 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 LOC102723971A0A1B0GUV8 181 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ANHXE9PGG2 379 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 GPR37L1O60883 481 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MT-ND2P03891 347 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 FPR1P21462 350 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TM4SF1P30408 202 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 C14orf28Q4W4Y0 310 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MTURNQ8N3F0 131 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 Q8N402 240 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SLCO4A1Q96BD0 722 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MTHFD2LQ9H903 347 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RANGRFQ9HD47 186 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 FBXO8Q9NRD0 319 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CD300AQ9UGN4 299 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 NME7Q9Y5B8 376 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MUC21A0A0G2JKD1 596 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MUC21A0A140T8X8 626 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RBBP9O75884 186 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 DCKP27707 260 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RAB7AP51149 207 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 RAB31Q13636 194 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 NPY5RQ15761 445 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MUC21Q5SSG8 566 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 B3GNTL1Q67FW5 361 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 C10orf82Q8WW14 230 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 PSMF1Q92530 271 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SPTSSAQ969W0 71 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 GUCD1Q96NT3 240 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 GPX7Q96SL4 187 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 SLC46A2Q9BY10 475 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ATP13A2Q9NQ11 1180 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 GSN-AS1Q9NRJ2 163 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 TAS2R16Q9NYV7 291 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 ENPP4Q9Y6X5 453 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 MEGF11A6BM72 1044 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 GABARAPH6UMI1 98 aa3.04□□□□□ -1.92
SYNE2-212ENST00000554584 CAPN5O15484 640 aaPredicted RBP3.04□□□□□ -1.92
SYNE2-212ENST00000554584 GABARAPO95166 117 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms