RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 SLC35F2Q8IXU6 374 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 SEMA4CQ9C0C4 833 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 SYT4Q9H2B2 425 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 GRHPRQ9UBQ7 328 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 UBQLN2Q9UHD9 624 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 ZNF222Q9UK12 451 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 HIF3AQ9Y2N7 669 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 SLC6A5Q9Y345 797 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 PCDHGB7Q9Y5F8 929 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 COL5A1P20908 1838 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-212ENST00000554467 A0A1W2PPL8 197 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 G3V3Q6 166 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 H3BML4 177 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 MT-ND5P03915 603 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 CD14P08571 375 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 PRKAR1AP10644 381 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 SLC6A8P48029 635 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 CENPAP49450 140 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 MESTQ5EB52 335 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 SLC6A19Q695T7 634 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 ARL5BQ96KC2 179 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 SLC19A3Q9BZV2 496 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 GHITMQ9H3K2 345 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 TRIM36Q9NQ86 728 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 ING4Q9UNL4 249 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 B3GALT1Q9Y5Z6 326 aa10.55□□□□□ -0.72
SHMT2-212ENST00000554467 LAMA5O15230 3695 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 G3V3Y1 287 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 PAHP00439 452 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 SP9P0CG40 484 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 SHC1P29353 583 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 BTCP35070 178 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 ZNF81P51508 661 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 POLR2GP62487 172 aaKnown RBP eCLIP10.54□□□□□ -0.72
SHMT2-212ENST00000554467 CAMK2DQ13557 499 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 MZT2BQ6NZ67 158 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 FAM122BQ7Z309 247 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 NR2C2APQ86WQ0 139 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 PM20D2Q8IYS1 436 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 LRRC75AQ8NAA5 344 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 SNX33Q8WV41 574 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 DDOQ99489 341 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 PDCD1LG2Q9BQ51 273 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 ALG12Q9BV10 488 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 PTDSS2Q9BVG9 487 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 SAV1Q9H4B6 383 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-212ENST00000554467 TAS2R5Q9NYW4 299 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 EXTL2Q9UBQ6 330 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 KLHDC2Q9Y2U9 406 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 TRAV6A0A075B6T7 132 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 LNP1A1A4G5 178 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 NTN3O00634 580 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-212ENST00000554467 RPP14O95059 124 aaKnown RBP10.54□□□□□ -0.72
SHMT2-212ENST00000554467 HLA-DPB1P04440 258 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 HLA-DOBP13765 273 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 SLC6A1P30531 599 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 MELKQ14680 651 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 MRPL14Q6P1L8 145 aaKnown RBP10.54□□□□□ -0.72
SHMT2-212ENST00000554467 HSD17B8Q92506 261 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 CXorf58Q96LI9 332 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 RANBP3Q9H6Z4 567 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-212ENST00000554467 BEX1Q9HBH7 125 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 SDHAF2Q9NX18 166 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 SLC39A1Q9NY26 324 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 GPN3Q9UHW5 284 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-212ENST00000554467 FREM3P0C091 2139 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 TRDV1A0A1B0GX56 115 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 A0A1W2PQD3 144 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 hCG_1807616A0A1W2PRN6 198 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 YKT6O15498 198 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 EIF4E2O60573 245 aaKnown RBP10.54□□□□□ -0.72
SHMT2-212ENST00000554467 LDOC1O95751 146 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-212ENST00000554467 BGLAPP02818 100 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 DIO1P49895 249 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 OR10A3P58181 314 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 GPR176Q14439 515 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 PLA1AQ53H76 456 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 OR6V1Q8N148 313 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 SAMD12Q8N8I0 201 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 GHSRQ92847 366 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 CREB3L1Q96BA8 519 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 RADILQ96JH8 1075 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 DEFB126Q9BYW3 111 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 GSX2Q9BZM3 304 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 MYOTQ9UBF9 498 aa10.54□□□□□ -0.72
SHMT2-212ENST00000554467 TEX46H3BTG2 121 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 ARPC3O15145 178 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 IFNA7P01567 189 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 KLK3P07288 261 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-212ENST00000554467 UMODP07911 640 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 FGF5P12034 268 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 SDHAP31040 664 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 SF3A2Q15428 464 aaKnown RBP10.53□□□□□ -0.72
SHMT2-212ENST00000554467 C1orf140Q5VVS0 124 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 CD200R1LQ6Q8B3 271 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 ZNF417Q8TAU3 575 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 PELI1Q96FA3 418 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 ZFP3Q96NJ6 502 aa10.53□□□□□ -0.72
SHMT2-212ENST00000554467 ZNF587Q96SQ5 575 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-212ENST00000554467 SEC22CQ9BRL7 303 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms