RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 SSBP1Q04837 148 aaKnown RBP11.66□□□□□ -0.54
SHMT2-205ENST00000553474 TCF15Q12870 199 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 BTBD16Q32M84 506 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 C1orf140Q5VVS0 124 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 LAMTOR1Q6IAA8 161 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 UTS2BQ765I0 119 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 LSRQ86X29 649 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-205ENST00000553474 C9orf62Q8N4C0 152 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 OR11H7Q8NGC8 314 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 GPR119Q8TDV5 335 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 THEM6Q8WUY1 208 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-205ENST00000553474 GIMAP1Q8WWP7 306 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 TMEM106AQ96A25 262 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF501Q96CX3 271 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-205ENST00000553474 C4orf45Q96LM5 186 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 DPYSL5Q9BPU6 564 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 AUNIPQ9H7T9 357 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 HRASLSQ9HDD0 168 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 TAS2R10Q9NYW0 307 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 MKL2Q9ULH7 1088 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 B9D1Q9UPM9 204 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 HSPB11Q9Y547 144 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 NPTNQ9Y639 398 aa11.66□□□□□ -0.54
SHMT2-205ENST00000553474 UNC13CQ8NB66 2214 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 ADAMTS20P59510 1910 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 IGLV3-12A0A075B6K2 115 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 A6NIZ1 184 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 PSMD9O00233 223 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF593O00488 134 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-205ENST00000553474 XRCC3O43542 346 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 OR6A2O95222 327 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 CPN1P15169 458 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 PNLIPP16233 465 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 RAP1BP61224 184 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 RAP1AP62834 184 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 ZP4Q12836 540 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 IKZF1Q13422 519 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 SLC17A1Q14916 467 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 ACKR1Q16570 336 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 VWA2Q5GFL6 755 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 ESPNLQ6ZVH7 1005 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 ADGRG3Q86Y34 549 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 PM20D2Q8IYS1 436 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 PRR22Q8IZ63 422 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF248Q8NDW4 579 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 RNF128Q8TEB7 428 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 ATOH1Q92858 354 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF524Q96C55 264 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 RTN4RQ9BZR6 473 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 SEMA4CQ9C0C4 833 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 FGF21Q9NSA1 209 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 RCE1Q9Y256 329 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 EXPH5Q8NEV8 1989 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 CACNA1EQ15878 2313 aa11.65□□□□□ -0.54
SHMT2-205ENST00000553474 TVP23AA6NH52 213 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 BCAT2O15382 392 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-205ENST00000553474 PRKNO60260 465 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-205ENST00000553474 MT-ND4P03905 459 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 ANKRD34CP0C6C1 535 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 FOLR1P15328 257 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 NAGAP17050 411 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 ADRA2CP18825 462 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 CSNK1EP49674 416 aaKnown RBP11.64□□□□□ -0.55
SHMT2-205ENST00000553474 CCR6P51684 374 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 CAPZA1P52907 286 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 CFHR1Q03591 330 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 GLO1Q04760 184 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 C17orf67Q0P5P2 114 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 RHBDD2Q6NTF9 364 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 DNM1P34Q6PK57 102 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 PRSS45Q7RTY3 260 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 RABEPKQ7Z6M1 372 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 TMPRSS12Q86WS5 348 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 OR52I2Q8NH67 350 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 ZNF431Q8TF32 576 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-205ENST00000553474 GPR137Q96N19 417 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 PRRX2Q99811 253 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 ZFP64Q9NPA5 681 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 SCP2D1Q9UJQ7 156 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 ZNF222Q9UK12 451 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 PPIEQ9UNP9 301 aaKnown RBP11.64□□□□□ -0.55
SHMT2-205ENST00000553474 FER1L5A0AVI2 2057 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 IGLV1-36A0A0B4J1U3 117 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 H7C1C5 153 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 PLPP3O14495 311 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 SDC3O75056 442 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 KHDRBS3O75525 346 aaKnown RBP11.64□□□□□ -0.55
SHMT2-205ENST00000553474 GLSO94925 669 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-205ENST00000553474 CFIP05156 583 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 CD2P06729 351 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 ADRB1P08588 477 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 CDK2P24941 298 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 TAS2R20P59543 309 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 LCN6P62502 163 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 GALK2Q01415 458 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 SQSTM1Q13501 440 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 TOMM34Q15785 309 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-205ENST00000553474 COL28A1Q2UY09 1125 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 C6orf183Q5T699 404 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms