RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 FAM86B1Q8N7N1 296 aa4.41□□□□□ -1.7
SCFD1-208ENST00000553278 MNS1Q8NEH6 495 aa4.41□□□□□ -1.7
SCFD1-208ENST00000553278 TCP10LQ8TDR4 215 aa4.41□□□□□ -1.7
SCFD1-208ENST00000553278 DUS3LQ96G46 650 aaKnown RBP4.41□□□□□ -1.7
SCFD1-208ENST00000553278 ZNF184Q99676 751 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-208ENST00000553278 KIR2DL4Q99706 377 aa4.41□□□□□ -1.7
SCFD1-208ENST00000553278 OSBPL10Q9BXB5 764 aa4.41□□□□□ -1.7
SCFD1-208ENST00000553278 DEFB129Q9H1M3 183 aa4.41□□□□□ -1.7
SCFD1-208ENST00000553278 QPCTLQ9NXS2 382 aa4.41□□□□□ -1.7
SCFD1-208ENST00000553278 GNPTGQ9UJJ9 305 aa4.41□□□□□ -1.7
SCFD1-208ENST00000553278 RCL1Q9Y2P8 373 aaKnown RBP4.41□□□□□ -1.7
SCFD1-208ENST00000553278 CENPJQ9HC77 1338 aaPredicted RBP4.41□□□□□ -1.7
SCFD1-208ENST00000553278 RALGAPA1Q6GYQ0 2036 aa4.4□□□□□ -1.7
SCFD1-208ENST00000553278 TSPAN11A1L157 253 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 RAB19A4D1S5 217 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 PRSS37A4D1T9 235 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 ERVV-1B6SEH8 477 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 C12orf77C9JDV5 145 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 LINC01565O15544 149 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 LSM8O95777 96 aaKnown RBP4.4□□□□□ -1.71
SCFD1-208ENST00000553278 HBE1P02100 147 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 SPAM1P38567 509 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 NBL1P41271 181 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 RORCP51449 518 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 DLX1P56177 255 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 PSMC5P62195 406 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 IRX3P78415 501 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-208ENST00000553278 SP4Q02446 784 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 TWF1Q12792 350 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 GPR176Q14439 515 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 USF2Q15853 346 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-208ENST00000553278 RPEL1Q2QD12 228 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 HSD17B11Q8NBQ5 300 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 OR9G1Q8NH87 305 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 NUBPLQ8TB37 319 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 TMEM54Q969K7 222 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 PIK3IP1Q96FE7 263 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 DNAJC1Q96KC8 554 aaKnown RBP4.4□□□□□ -1.71
SCFD1-208ENST00000553278 GLT1D1Q96MS3 346 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 SMIM14Q96QK8 99 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 TSG101Q99816 390 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 SOSTQ9BQB4 213 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 EBF4Q9BQW3 602 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 TRIM15Q9C019 465 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 PTGES2Q9H7Z7 377 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 ZDHHC11Q9H8X9 412 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 PLGRKTQ9HBL7 147 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 PRSS16Q9NQE7 514 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 ZNF282Q9UDV7 671 aaPredicted RBP4.4□□□□□ -1.71
SCFD1-208ENST00000553278 ADGRA3Q8IWK6 1321 aa4.4□□□□□ -1.71
SCFD1-208ENST00000553278 A0A087WYN8 130 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ZNF816-ZNF321PA0A0X1KG74 233 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 A0A1B0GW55 424 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 F6UB75 175 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 PLPP1O14494 284 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 SLC9A3R1O14745 358 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-208ENST00000553278 SLC19A2O60779 497 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 YEATS4O95619 227 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 IGHV3-48P01763 117 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 DUX4L2P0CJ85 424 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 DUX4L3P0CJ86 424 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 DUX4L4P0CJ87 422 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 DUX4L5P0CJ88 424 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 DUX4L6P0CJ89 424 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 DUX4L7P0CJ90 424 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 CCL2P13500 99 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 PRKAR2BP31323 418 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 SLC26A3P40879 764 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 RFC3P40938 356 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 CSKP41240 450 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ZNF763Q0D2J5 394 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 CLINT1Q14677 625 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ANGPT1Q15389 498 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 GSG1Q2KHT4 349 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ADNP2Q6IQ32 1131 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ADAM5Q6NVV9 412 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ERICH5Q6P6B1 374 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 DUX4L9Q6RFH8 374 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ASCL4Q6XD76 172 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ZNF620Q6ZNG0 422 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 SLC35D2Q76EJ3 337 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 FAM220AQ7Z4H9 259 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 HSD17B13Q7Z5P4 300 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-208ENST00000553278 TMEM150AQ86TG1 271 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 RBM45Q8IUH3 476 aaKnown RBP4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ZNF740Q8NDX6 193 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 VN1R2Q8NFZ6 395 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 SIGLEC12Q96PQ1 595 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 VGLL1Q99990 258 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 POLR2J2Q9GZM3 115 aaKnown RBP4.39□□□□□ -1.71
SCFD1-208ENST00000553278 RAB1BQ9H0U4 201 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 POLR2J3Q9H1A7 115 aaKnown RBP4.39□□□□□ -1.71
SCFD1-208ENST00000553278 OR51J1Q9H342 316 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ACP6Q9NPH0 428 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 CLN6Q9NWW5 311 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ADAM22Q9P0K1 906 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 DUX4Q9UBX2 424 aa4.39□□□□□ -1.71
SCFD1-208ENST00000553278 ZNF256Q9Y2P7 627 aaPredicted RBP4.39□□□□□ -1.71
SCFD1-208ENST00000553278 A0A0B4J2A0 478 aa4.38□□□□□ -1.71
SCFD1-208ENST00000553278 A0A1W2PRF3 423 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms