RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 POU3F4P49335 361 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 PSMD4P55036 377 aaKnown RBP11.22□□□□□ -0.61
HDAC7-230ENST00000552960 GPR85P60893 370 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 RPS15AP62244 130 aaKnown RBP11.22□□□□□ -0.61
HDAC7-230ENST00000552960 MRPS10P82664 201 aaKnown RBP11.22□□□□□ -0.61
HDAC7-230ENST00000552960 ALKBH1Q13686 389 aaKnown RBP11.22□□□□□ -0.61
HDAC7-230ENST00000552960 PDSS1Q5T2R2 415 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 ARHGAP40Q5TG30 622 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 ZNF425Q6IV72 752 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 SLC36A1Q7Z2H8 476 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 ZFP82Q8N141 532 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 EID2Q8N6I1 236 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 PLPP7Q8NBV4 271 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 TRIM2Q9C040 744 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 DUSP22Q9NRW4 184 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 ZNF275Q9NSD4 429 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-230ENST00000552960 C14orf105Q9NVL8 296 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 DUX4Q9UBX2 424 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 LAMP5Q9UJQ1 280 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 ERVK-19Q9WJR5 959 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 PRELID3BQ9Y3B1 194 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 ENTPD2Q9Y5L3 495 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 H7C417 338 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 GPR31O00270 319 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 ZNF749O43361 778 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 NDUFA2O43678 99 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 CTNSO60931 367 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 TACSTD2P09758 323 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 MRPS21P82921 87 aaKnown RBP11.22□□□□□ -0.61
HDAC7-230ENST00000552960 EIF2B5Q13144 721 aaKnown RBP11.22□□□□□ -0.61
HDAC7-230ENST00000552960 SQSTM1Q13501 440 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 FHL1Q13642 323 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 UBXN2BQ14CS0 331 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 ALG11Q2TAA5 492 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 UNQ6126/PRO20091Q6UXV3 157 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 LRRC69Q6ZNQ3 347 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 DGAT2L6Q6ZPD8 337 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 USP53Q70EK8 1073 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 NAXDQ8IW45 347 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 STEAP2Q8NFT2 490 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 SERINC2Q96SA4 455 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 COMMD9Q9P000 198 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 MTFP1Q9UDX5 166 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 SERTAD3Q9UJW9 196 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 COLEC10Q9Y6Z7 277 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 SPACA6W5XKT8 324 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 GGT3PA6NGU5 568 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 OR6C65A6NJZ3 312 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 SEMA4FO95754 770 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 AMY2AP04746 511 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 AKAIN1P0CW23 69 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 CALCBP10092 127 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 MST1P26927 711 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 ACAA2P42765 397 aaKnown RBP11.22□□□□□ -0.61
HDAC7-230ENST00000552960 STEAP1BQ6NZ63 245 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 C12orf45Q8N5I9 185 aaPredicted RBP11.22□□□□□ -0.61
HDAC7-230ENST00000552960 OR2M4Q96R27 311 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 IFT22Q9H7X7 185 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 APMAPQ9HDC9 416 aa11.22□□□□□ -0.61
HDAC7-230ENST00000552960 DCTN6O00399 190 aa11.21□□□□□ -0.61
HDAC7-230ENST00000552960 LDOC1O95751 146 aaPredicted RBP11.21□□□□□ -0.61
HDAC7-230ENST00000552960 TSFMP43897 325 aaKnown RBP11.21□□□□□ -0.61
HDAC7-230ENST00000552960 CTXN1P60606 82 aa11.21□□□□□ -0.61
HDAC7-230ENST00000552960 AKIRIN2Q53H80 203 aa11.21□□□□□ -0.61
HDAC7-230ENST00000552960 PRRT3Q5FWE3 981 aa11.21□□□□□ -0.61
HDAC7-230ENST00000552960 ULK3Q6PHR2 472 aa11.21□□□□□ -0.61
HDAC7-230ENST00000552960 SLC35D2Q76EJ3 337 aa11.21□□□□□ -0.61
HDAC7-230ENST00000552960 PPP1R14AQ96A00 147 aa11.21□□□□□ -0.61
HDAC7-230ENST00000552960 RERGQ96A58 199 aaPredicted RBP11.21□□□□□ -0.61
HDAC7-230ENST00000552960 PHF7Q9BWX1 381 aaPredicted RBP11.21□□□□□ -0.61
HDAC7-230ENST00000552960 WDR13Q9H1Z4 485 aa11.21□□□□□ -0.61
HDAC7-230ENST00000552960 C8orf33Q9H7E9 229 aaPredicted RBP11.21□□□□□ -0.61
HDAC7-230ENST00000552960 ASF1BQ9NVP2 202 aa11.21□□□□□ -0.61
HDAC7-230ENST00000552960 ACTR10Q9NZ32 417 aa11.21□□□□□ -0.61
HDAC7-230ENST00000552960 MRM2Q9UI43 246 aaKnown RBP11.21□□□□□ -0.61
HDAC7-230ENST00000552960 SLC22A7Q9Y694 548 aa11.21□□□□□ -0.61
HDAC7-230ENST00000552960 HRKO00198 91 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 XRCC3O43542 346 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 RAB3DO95716 219 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 CSTAP01040 98 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 CSF1P09603 554 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 HNRNPA2B1P22626 353 aaKnown RBP11.21□□□□□ -0.62
HDAC7-230ENST00000552960 UBE2IP63279 158 aaKnown RBP11.21□□□□□ -0.62
HDAC7-230ENST00000552960 ZNHIT3Q15649 155 aaPredicted RBP11.21□□□□□ -0.62
HDAC7-230ENST00000552960 CD163Q86VB7 1156 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 CMTM3Q96MX0 182 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 ELF4Q99607 663 aaPredicted RBP11.21□□□□□ -0.62
HDAC7-230ENST00000552960 TIMM29Q9BSF4 260 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 COMMD4Q9H0A8 199 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 LMAN1LQ9HAT1 526 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 MED9Q9NWA0 146 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 DNAJB12Q9NXW2 375 aaKnown RBP11.21□□□□□ -0.62
HDAC7-230ENST00000552960 ICAM5Q9UMF0 924 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 RTTNQ86VV8 2226 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 ASXL3Q9C0F0 2248 aa11.21□□□□□ -0.62
HDAC7-230ENST00000552960 URADA6NGE7 173 aa11.2□□□□□ -0.62
HDAC7-230ENST00000552960 F5H0A9 414 aaPredicted RBP11.2□□□□□ -0.62
HDAC7-230ENST00000552960 CTAG2O75638 210 aa11.2□□□□□ -0.62
HDAC7-230ENST00000552960 GPR75O95800 540 aa11.2□□□□□ -0.62
HDAC7-230ENST00000552960 OR4E1P0C645 316 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms