RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ORC6Q9Y5N6 252 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 CACNA1DQ01668 2161 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 ITPR2Q14571 2701 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 SPG11Q96JI7 2443 aa9□□□□□ -0.97
TRAFD1-208ENST00000552890 ALPK2Q86TB3 2170 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 RIIAD1A6NNX1 92 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 DEFB108AA8MXU0 73 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 KHDRBS3O75525 346 aaKnown RBP8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 IGKV3-15P01624 115 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 RAF1P04049 648 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 THBDP07204 575 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF3P17036 446 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 CD40P25942 277 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 SELENOVP59797 346 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 LSM6P62312 80 aaKnown RBP8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 ERVK-25P63136 954 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 TOP3AQ13472 1001 aaPredicted RBP8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 ATP6AP1Q15904 470 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 MOGQ16653 247 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 FAM27BQ5VT28 67 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF544Q6NX49 715 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 SLC22A25Q6T423 547 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF704Q6ZNC4 412 aaPredicted RBP8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 SLC16A14Q7RTX9 510 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 GLB1L2Q8IW92 636 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF611Q8N823 705 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 LRRC75AQ8NAA5 344 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 SYT14Q8NB59 555 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 OR52N5Q8NH56 324 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 OR5K1Q8NHB7 308 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF519Q8TB69 540 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 FBXW5Q969U6 566 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 COG8Q96MW5 612 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 ERMAPQ96PL5 475 aaPredicted RBP8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 FEVQ99581 238 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 TMEM204Q9BSN7 226 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 GRIP2Q9C0E4 1043 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 C8orf4Q9NR00 106 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 TBC1D23Q9NUY8 699 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 TMEM38BQ9NVV0 291 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 VSX1Q9NZR4 365 aaPredicted RBP8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 PDP1Q9P0J1 537 aaPredicted RBP8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 GPR160Q9UJ42 338 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 U3KQV3 271 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 CELSR2Q9HCU4 2923 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 CRYBG3Q68DQ2 2970 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 CREBBPQ92793 2442 aa8.99□□□□□ -0.97
TRAFD1-208ENST00000552890 ANKRD17O75179 2603 aaKnown RBP8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 G3V2T6 193 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 H3BN98 237 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 HS3ST1O14792 307 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 GASTP01350 101 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 ERCC1P07992 297 aaPredicted RBP8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 CST2P09228 141 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 CD79AP11912 226 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 MSR1P21757 451 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 ESRRGP62508 458 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 RAB1AP62820 205 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 GALK2Q01415 458 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 HSF2Q03933 536 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 BSPH1Q075Z2 132 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 LGALS3BPQ08380 585 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 SCRN3Q0VDG4 424 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 MELKQ14680 651 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 C9orf135Q5VTT2 229 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 AGAP6Q5VW22 663 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF770Q6IQ21 691 aaPredicted RBP8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 ALKBH2Q6NS38 261 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 SLC27A4Q6P1M0 643 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 LRFN4Q6PJG9 635 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 FAM122BQ7Z309 247 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 CDH24Q86UP0 819 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 PARP8Q8N3A8 854 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 LNX2Q8N448 690 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 WDR31Q8NA23 367 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 OR2T4Q8NH00 348 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 MBD6Q96DN6 1003 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 PLEKHA8Q96JA3 519 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 TSPAN32Q96QS1 320 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 RNF121Q9H920 327 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 BEX4Q9NWD9 120 aaPredicted RBP8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 ATPIF1Q9UII2 106 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 NDRG4Q9ULP0 352 aaKnown RBP8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 TIMM10BQ9Y5J6 103 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 IER3IP1Q9Y5U9 82 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 FKBP7Q9Y680 259 aa8.98□□□□□ -0.97
TRAFD1-208ENST00000552890 A0A096LPE4 126 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 TEX13CA0A0J9YWL9 993 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 A0A1W2PPZ6 126 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 M0R1B8 84 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 ABCD4O14678 606 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 IGLV1-44P01699 117 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 SERPINA5P05154 406 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 OSMP13725 252 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 B4GALT1P15291 398 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 LAP3P28838 519 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 APLNRP35414 380 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 ZNF83P51522 516 aa8.97□□□□□ -0.97
TRAFD1-208ENST00000552890 MYBPC1Q00872 1141 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms