RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 MLLT11Q13015 90 aaPredicted RBP5.32□□□□□ -1.56
VPS29-210ENST00000552130 ASAH1Q13510 395 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 RAB31Q13636 194 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 ZNF268Q14587 947 aaPredicted RBP5.32□□□□□ -1.56
VPS29-210ENST00000552130 SLC9A3R2Q15599 337 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 FAM106AQ4KMX7 169 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 ZCWPW2Q504Y3 356 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 VWA2Q5GFL6 755 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 DCST2Q5T1A1 773 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 C3orf33Q6P1S2 294 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 SLC51BQ86UW2 128 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 CALHM1Q8IU99 346 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 WDFY1Q8IWB7 410 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 PRSS58Q8IYP2 241 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 STPG2Q8N412 459 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 EID2Q8N6I1 236 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 OR2D3Q8NGH3 330 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 OR51A7Q8NH64 312 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 ADAMTS16Q8TE57 1224 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 TBCKQ8TEA7 893 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 APH1BQ8WW43 257 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 DYDC1Q8WWB3 177 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 TMEM59Q9BXS4 323 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 LHX5Q9H2C1 402 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 RBKSQ9H477 322 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 DHX35Q9H5Z1 703 aaKnown RBP5.32□□□□□ -1.56
VPS29-210ENST00000552130 C12orf4Q9NQ89 552 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 SLC2A9Q9NRM0 540 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 SLC25A37Q9NYZ2 338 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 MSRB1Q9NZV6 116 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 ERVW-1Q9UQF0 538 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 SNX24Q9Y343 169 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 MTCH2Q9Y6C9 303 aa5.32□□□□□ -1.56
VPS29-210ENST00000552130 A0A1B0GTH9 108 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 A0A1B0GU03 582 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 A0A1B0GW55 424 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 ANKRD20A5PA0PJZ0 165 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 EFCAB7A8K855 629 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 C9J4A7 227 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 FTCDNL1E5RQL4 147 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 GFYI3L273 518 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 FCN1O00602 326 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 FGF16O43320 207 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 CLDN11O75508 207 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 TRAPPC6AO75865 159 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 GAGE7O76087 117 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 LSM8O95777 96 aaKnown RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 CLIC3O95833 236 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 SERPINA1P01009 418 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 CATP04040 527 aaKnown RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 SERPINB2P05120 415 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 SERPINA5P05154 406 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 CALB1P05937 261 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 HOXD4P09016 255 aaPredicted RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 ACSM4P0C7M7 580 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 DUX4L2P0CJ85 424 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 DUX4L3P0CJ86 424 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 DUX4L4P0CJ87 422 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 DUX4L5P0CJ88 424 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 DUX4L6P0CJ89 424 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 DUX4L7P0CJ90 424 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 GAGE12FP0CL80 117 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 GAGE12GP0CL81 117 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 GAGE12IP0CL82 117 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 IDO1P14902 403 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 HIST1H1CP16403 213 aaKnown RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 CSNK2A2P19784 350 aaPredicted RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 CA6P23280 308 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 CAV2P51636 162 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 RPL8P62917 257 aaKnown RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 PRKCDQ05655 676 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 GAGE1Q13065 139 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 GAGE4Q13068 117 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 GPR18Q14330 331 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 SPCS2Q15005 226 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 OXA1LQ15070 435 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 ACSM3Q53FZ2 586 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 CCNJQ5T5M9 372 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 HACD4Q5VWC8 232 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 ANKRD26P1Q6NSI1 321 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 DUX4L9Q6RFH8 374 aaPredicted RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 STAC2Q6ZMT1 411 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 C9orf139Q6ZV77 190 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 IFNEQ86WN2 208 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 OR4N5Q8IXE1 308 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 ODF3L1Q8IXM7 274 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 FAM71AQ8IYT1 594 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 CCDC54Q8NEL0 328 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 OR9Q2Q8NGE9 314 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 PIGXQ8TBF5 258 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 NELFBQ8WX92 580 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 NDRG1Q92597 394 aaKnown RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 MRPS31Q92665 395 aaKnown RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 PPWD1Q96BP3 646 aaKnown RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 OXGR1Q96P68 337 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 FAIM2Q9BWQ8 316 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 ABCB9Q9NP78 766 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 INTS9Q9NV88 658 aaKnown RBP5.31□□□□□ -1.56
VPS29-210ENST00000552130 DUX4Q9UBX2 424 aa5.31□□□□□ -1.56
VPS29-210ENST00000552130 USH1CQ9Y6N9 552 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms