RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 HNRNPCL2B2RXH8 293 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 HNRNPCL3B7ZW38 293 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 HNRNPCL1O60812 293 aaKnown RBP12.85□□□□□ -0.35
CACNB3-220ENST00000551716 TSPAN15O95858 294 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 HNRNPCL4P0DMR1 293 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 TNFRSF1AP19438 455 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 ALDH3A1P30838 453 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 KRTAP10-3P60369 221 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 ZNF621Q6ZSS3 439 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 SLC16A14Q7RTX9 510 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 MUC20Q8N307 709 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-220ENST00000551716 LSMEM1Q8N8F7 131 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 RAB40AQ8WXH6 277 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 DYRK2Q92630 601 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 TMEM54Q969K7 222 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 SH3GL3Q99963 347 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 CHIAQ9BZP6 476 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 PPCSQ9HAB8 311 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 TNFRSF19Q9NS68 423 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 TMEM38BQ9NVV0 291 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 THUMPD1Q9NXG2 353 aaKnown RBP12.85□□□□□ -0.35
CACNB3-220ENST00000551716 MRPL39Q9NYK5 338 aaKnown RBP12.85□□□□□ -0.35
CACNB3-220ENST00000551716 GLTPQ9NZD2 209 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 KLHL14Q9P2G3 628 aa12.85□□□□□ -0.35
CACNB3-220ENST00000551716 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.85□□□□□ -0.35
CACNB3-220ENST00000551716 F5H0A9 414 aaPredicted RBP12.84□□□□□ -0.35
CACNB3-220ENST00000551716 CSF1P09603 554 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 CBLP22681 906 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 TNFSF4P23510 183 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 AHCYP23526 432 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 MDH2P40926 338 aaKnown RBP12.84□□□□□ -0.35
CACNB3-220ENST00000551716 SEC61A1P61619 476 aaKnown RBP12.84□□□□□ -0.35
CACNB3-220ENST00000551716 BTG1P62324 171 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 SPANXN4Q5MJ08 99 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 VAX1Q5SQQ9 334 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 THEM4Q5T1C6 240 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 MBNL2Q5VZF2 373 aaKnown RBP12.84□□□□□ -0.35
CACNB3-220ENST00000551716 ZER1Q7Z7L7 766 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 ZNF283Q8N7M2 679 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 RBM15BQ8NDT2 890 aaKnown RBP12.84□□□□□ -0.35
CACNB3-220ENST00000551716 OR6X1Q8NH79 312 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 LINC01006Q8NI28 216 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 TBC1D15Q8TC07 691 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 SSMEM1Q8WWF3 244 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 MARS2Q96GW9 593 aaKnown RBP12.84□□□□□ -0.35
CACNB3-220ENST00000551716 RHOXF2Q9BQY4 288 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 MARCH7Q9H992 704 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 SLC6A13Q9NSD5 602 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 SELENONQ9NZV5 590 aa12.84□□□□□ -0.35
CACNB3-220ENST00000551716 TRAV40A0A0B4J280 105 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 KIR2DS1A0A191URI9 304 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 MDFIC2A0A1B0GVS7 189 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 ZSCAN5BA6NJL1 495 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 E9PBE3 544 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 H3BSA7 217 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 ZNF500O60304 480 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-220ENST00000551716 LOXL3P58215 753 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 PROK1P58294 105 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 TNFAIP6P98066 277 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-220ENST00000551716 PAX2Q02962 417 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 HSF2Q03933 536 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 MAPK11Q15759 364 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 TTMPQ5BVD1 217 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 ALG10BQ5I7T1 473 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 COX20Q5RI15 118 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 GPR157Q5UAW9 335 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 FAM91A1Q658Y4 838 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 ULK3Q6PHR2 472 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 OR4K5Q8NGD3 323 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 KLF14Q8TD94 323 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-220ENST00000551716 SLC38A5Q8WUX1 472 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 GEMIN6Q8WXD5 167 aaKnown RBP12.83□□□□□ -0.36
CACNB3-220ENST00000551716 ZNF566Q969W8 418 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 PPP1R14AQ96A00 147 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 SLC47A1Q96FL8 570 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 PLEKHA8Q96JA3 519 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 SAMD8Q96LT4 415 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 SSBP3Q9BWW4 388 aaPredicted RBP12.83□□□□□ -0.36
CACNB3-220ENST00000551716 KCNN2Q9H2S1 579 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 AKTIPQ9H8T0 292 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 CHST2Q9Y4C5 530 aa12.83□□□□□ -0.36
CACNB3-220ENST00000551716 IGHV2-70DA0A0C4DH43 119 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 PLPP3O14495 311 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 DHHO43323 396 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 C1QCP02747 245 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 WNT2P09544 360 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 CCNOP22674 350 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 BIDP55957 195 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 ZMYND11Q15326 602 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 FAM189A2Q15884 450 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 WHAMMP3Q1A5X7 153 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 LRFN4Q6PJG9 635 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 WDR88Q6ZMY6 472 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 POU5F2Q8N7G0 328 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 HIPK4Q8NE63 616 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 BHLHE22Q8NFJ8 381 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-220ENST00000551716 IPCEF1Q8WWN9 437 aaPredicted RBP12.82□□□□□ -0.36
CACNB3-220ENST00000551716 KIF17Q9P2E2 1029 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 PYCARDQ9ULZ3 195 aa12.82□□□□□ -0.36
CACNB3-220ENST00000551716 IGKV1D-42A0A075B6H8 117 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms